Flavobacterium sediminis: DI487_12160
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Entry
DI487_12160 CDS
T06625
Symbol
recN
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
fse
Flavobacterium sediminis
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fse03400
]
DI487_12160 (recN)
DNA repair and recombination proteins [BR:
fse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DI487_12160 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
DI487_12160 (recN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
SRPRB
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AWM14536
UniProt:
A0A2U8QXC6
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All DBs
Position
2621034..2622686
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AA seq
550 aa
AA seq
DB search
MLLTLAIKNYALIDSLEINFSDRFSIITGETGAGKSILLGALGLVLGNRADLSSLKDEEQ
KCVVEAHFDVSKYDLKSVFEASDFDYEEVTIIRREILPSGKSRAFVNDSPVNLQELQGLA
NFLLDIHSQHQTRDLIDESYQIRILDAVAQNKELLAVFKKDLGVFKKLQKELQRLQAEKQ
SLLNEQEYNNFLLEELVQANLKESEQEELESEQEVLSNIEFVKENIDKVLALAKEEEIGI
LSSVNEAKNSLQKLASLSKEYQSLFERINSIYIELDDVVEECVGKQEQIVDDPGRLVYIN
ERLQFIYNLQKKHNVNTVAELLDIQNQLSEKATKFDAIDSEIDQAEVQKEIVFNRLEKTA
DEISGSRQLTAPKLEQALLEIVRPLGMPDAQIQFEIKPLEQFSETGKDSVSLLFSANKGM
KPGPIKKMASGGEMSRVMLAVKAVLAQSIDLPTIIFDEIDTGVSGEVALKMGEIMKEMSK
KMQVFAITHLPQIAAKGNQHYKVFKNEVGGVVNSEIKQLDANERVVEIAEMLSGKNITDS
ALAHAQTLLN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcttttaactttagctataaagaactatgcacttatcgattcgttagaaattaatttc
tcggatcgtttttccattattacaggagaaaccggtgcgggtaaatcaatcttgttagga
gctcttggactggttttaggaaatagagccgatttaagttcgcttaaagatgaagaacaa
aagtgtgtggtagaagcacattttgatgtaagtaaatacgatctgaaaagcgtttttgaa
gctagtgatttcgattatgaagaggtaacgatcatcaggagagagatattgccttccggt
aaatccagagcctttgtaaatgatagtcctgtaaatcttcaggagttacaaggcttggct
aattttttattagacatacattcccagcaccaaacccgtgatttgatcgatgaaagttac
caaatacggattttagatgcagttgctcaaaacaaagagcttttggctgtatttaaaaaa
gatttgggtgtttttaaaaaattacagaaagaactgcaaagattacaagccgaaaaacaa
tctcttttaaacgaacaagaatacaacaacttcttattggaggaattggttcaggctaat
ttaaaagagtctgaacaggaagagcttgaatcagagcaggaagttttaagcaatattgag
tttgttaaagaaaatatcgataaggttttggctttagccaaagaagaagaaataggtatt
ctttcttcagtcaatgaagctaagaacagtttacagaaattagcctcgttgtcaaaagaa
taccaaagtttatttgagcgaatcaatagtatttatatagaactggatgatgttgtagaa
gaatgtgtcgggaagcaggaacaaatcgtagacgatccggggcgattagtttatattaat
gaaagacttcagttcatttataatttacaaaagaaacataacgtaaatacagttgcggaa
cttctggatatacaaaatcaattaagtgaaaaagcgactaagtttgacgcaattgattcg
gagatagatcaggcagaagtgcaaaaagagatcgtttttaaccgattagagaaaacagcc
gatgaaatttcaggatcacgtcagctaacggcgcctaaactggaacaggcattgctggaa
attgtaagaccattaggaatgcccgatgcgcagatacagtttgaaataaaaccacttgag
caattttcggaaacagggaaagacagtgttagtttgttgttttcggctaataaagggatg
aaacccggtccgatcaaaaaaatggcttcgggaggagagatgtcgcgtgttatgttggca
gtaaaagctgtattagcacagtcaatagacttgccgacgattatttttgacgaaatagat
accggagtgtccggagaggtggcattaaaaatgggagagatcatgaaagagatgagtaaa
aagatgcaggtatttgccattactcatttaccacagatcgctgcaaaaggaaatcagcat
tacaaagtatttaaaaatgaagtagggggagtggtgaattctgaaatcaagcagttggat
gcaaacgaaagagttgtagagattgcagaaatgttgtcaggaaagaatattactgactcg
gcattggcacatgctcagacattattaaattaa
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