Flavobacterium sediminis: DI487_12420
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Entry
DI487_12420 CDS
T06625
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fse
Flavobacterium sediminis
Pathway
fse03030
DNA replication
fse03430
Mismatch repair
fse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DI487_12420
03430 Mismatch repair
DI487_12420
03440 Homologous recombination
DI487_12420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fse03032
]
DI487_12420
03400 DNA repair and recombination proteins [BR:
fse03400
]
DI487_12420
Enzymes [BR:
fse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DI487_12420
DNA replication proteins [BR:
fse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DI487_12420
DNA repair and recombination proteins [BR:
fse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DI487_12420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DEDDh_C
GIY_YIG_2
DNA_pol_A_exo1
DUF7508
DUF4623
T5orf172
Motif
Other DBs
NCBI-ProteinID:
AWM14579
UniProt:
A0A2U8QWZ4
LinkDB
All DBs
Position
complement(2692114..2693472)
Genome browser
AA seq
452 aa
AA seq
DB search
MYAILDIETTGGQYNEEGITEIAIYKFDGHNVVDQFISLVNPEIPIQPFVVKLTGINNSM
LRSAPKFFEVAKRIIEITEDSIIVAHNASFDYRVIRMEFNRLGYDFTRPTIDTVELSKKL
IPDQRSYSLGKLVRGLGIPIADRHRASGDAMATVKLFKLLLSKDKEKEIVKGFVKTELKS
GMSPKLLDIVENLPSKTGIYYIHNEKGDVIYIGKSKNIKKRVNQHFTGTSSKSKKIQREV
YAVTFEETGSELIALLKESEEIKINKPIYNRAQRRTIFQWALYTEKNEKGYLALKVQKAD
GRKKEITSFGTQQEGRTFLFKITEKYHLCQKINGLYDTKKSCFQYDIKQCYGACIDKEKP
EEYNQRVQTFIAESSFENNTMVIIDKGRSVEEKSAVLIENGIYKGYCFYDLNHQIINVDI
LKNLISPMQHNRDIKTIIQSFIRKNKVKIIRF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaatattagacatagaaaccactggtggccagtataacgaagaaggaattact
gaaattgcgatctacaaattcgacggacataatgtagtagatcaatttattagcttagta
aatcctgaaatcccgatccagccatttgtggtaaaacttaccggaatcaataattccatg
cttcgtagtgcacctaaattcttcgaagtagctaaacgcattattgagattaccgaagat
agtatcattgtggctcataatgcttcttttgactaccgtgttatccgaatggaattcaat
cgcttggggtacgattttacccgaccgacgattgatacggtggaactatctaaaaaatta
attcccgatcaaagatcttacagcttaggaaaactggttcgcggtttaggcatccctatt
gccgatcgtcatcgtgccagcggagatgctatggctaccgtaaaactttttaaattatta
ctttctaaagacaaagaaaaagagatcgttaaaggttttgtcaaaactgaattaaaatct
ggaatgtctcctaaattgctggatattgtggaaaatttaccttctaagactggtatttat
tatattcacaatgaaaaaggtgatgttatttacattggtaaaagtaaaaatataaagaaa
agggtcaatcagcattttacaggtacatcaagtaaaagcaaaaagatacagcgagaagtg
tatgccgtaacttttgaagaaaccggtagtgaactcatcgcactacttaaagaaagtgaa
gagatcaaaatcaataaaccgatctacaatcgcgcccaacgtcgaactatttttcaatgg
gctttgtatacggagaaaaatgaaaaagggtatttagccctaaaagttcagaaagctgac
ggacgtaaaaaagagatcacttcatttggtacacagcaggaaggaagaacttttctattt
aaaataactgaaaagtatcatctatgccagaaaattaacggcttatatgatactaaaaaa
agctgctttcagtacgatattaaacaatgctatggcgcctgtatagacaaggaaaaaccc
gaagaatacaatcaaagagtacaaacttttattgctgaaagttcctttgagaacaatact
atggttatcattgacaaaggaagaagtgtagaggaaaaaagtgctgttctgatagaaaac
ggaatttataaaggatattgcttttacgatctaaatcatcagattatcaacgtagatatt
ctgaaaaacctgatcagtccgatgcagcacaatcgggatattaaaactatcattcaaagc
ttcatccgaaaaaataaagttaagatcattcgtttttag
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