Flavobacterium sediminis: DI487_14000
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Entry
DI487_14000 CDS
T06625
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fse
Flavobacterium sediminis
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fse03400
]
DI487_14000
Enzymes [BR:
fse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DI487_14000
DNA repair and recombination proteins [BR:
fse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DI487_14000
Prokaryotic type
DI487_14000
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWM14856
UniProt:
A0A2U8QY66
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All DBs
Position
complement(3010280..3011572)
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AA seq
430 aa
AA seq
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MRIFWFRRDLRLEDNTGLYHALNSEEEVLPIFIFDPNILSQLPKNDARVTFIYQQLENLR
NQLEHAGRRLAVFSDDPLQVFEKLIEENPITTVYTNHDYEPYARKRDKAVFQLLQQHAVS
FKTCKDQVIFEKDEITKSDRSPYVIYTPYSKKWKEEWLHKTIVHHPSEKLLHKFAVHSYP
FLQLKDIGFEYSTITVSPYDLSEKLIANYKETRNFPAIHGTSFLSTHLRFGTVSIRKIVQ
KADTCSDKTFLNELIWREFFMQILWHFPHTVHKSFKPQYNNIIWNTHEKNFQLWCEGKTG
YPFVDAGMRELNTTGHMHNRVRMIVASFLCKHLLIDWRWGETYFAQKLLDYEQASNIGNW
QWAAGSGVDAAPYFRIFNPTEQIKKFDPDLRYIKKWIPELETDSYPKPIVDHKEARIRCL
ETYKKALEKI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattttggtttaggagagatctgcgcttagaagataataccggattatatcat
gctttgaattcggaggaagaggtcttgccgatttttatttttgacccgaatattctgtct
caattgcctaaaaacgatgcccgagtcacttttatttaccaacaattagaaaacctccgg
aatcaactcgaacatgcaggaagaagattagctgtcttttcagacgatcctttacaggtt
tttgaaaaactgattgaggaaaatcctattactacagtttataccaatcacgattacgaa
ccttatgcccgaaaacgggacaaagccgtttttcaacttttacagcaacatgccgtttca
tttaaaacgtgtaaagatcaggttattttcgaaaaggatgaaattacaaaaagtgacaga
tcgccttatgttatatatacaccctattctaaaaaatggaaagaagaatggcttcataaa
actattgtccatcacccgtcagaaaaattattacacaagttcgcagtccactcctaccct
tttttacaactgaaagatatcggttttgaatactcaactattacagttagtccttatgat
ctttctgaaaagctgattgcaaattataaagagacccgaaattttccggcgatccacgga
acttctttccttagtacacatttacgtttcggaacggtttctattcgtaaaattgttcaa
aaagcagatacttgttctgacaaaacatttttgaatgaactgatctggcgggaatttttc
atgcagatcctttggcactttccgcacactgttcataaaagtttcaaaccacagtacaac
aatattatctggaatacccacgaaaaaaatttccagttgtggtgtgaaggaaaaaccggt
tatccttttgtagatgccggcatgcgggaattaaatactaccggacacatgcacaacagg
gttcgcatgatcgtggcaagctttttatgcaagcatttattgatcgattggcgctggggc
gaaacctattttgctcaaaaattattagattatgaacaagccagtaatatagggaactgg
caatgggcagccggaagcggagttgatgcagcaccttacttcaggatttttaatcctacg
gagcagatcaaaaaatttgatcctgatctcagatacattaaaaaatggatcccggaattg
gaaaccgattcctatccgaaacctatcgtagaccacaaagaagcgcggataagatgtctt
gagacctataaaaaagcattggaaaaaatttaa
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