Flavobacterium sediminis: DI487_14555
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Entry
DI487_14555 CDS
T06625
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
fse
Flavobacterium sediminis
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fse03009
]
DI487_14555
Ribosome biogenesis [BR:
fse03009
]
Prokaryotic type
ribosomal protein modification factors
DI487_14555
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Gene cluster
GFIT
Motif
Pfam:
RimK
Zn_protease
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
R2K_3
Lac_bphage_repr
Dala_Dala_lig_C
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AWM14950
UniProt:
A0A2U8QXK6
LinkDB
All DBs
Position
complement(3137397..3138764)
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AA seq
455 aa
AA seq
DB search
MLDKVIVGSEEWCSFPTLGIPTIKARVDSGAKTSALHAVNIRPFQKDNEEWVKFDINPIQ
NNVKTVIHCEAPLIDQRIVKSSSGFREKRYVIRTQLEIGGKHWEVEVTLTNRDSMGFRML
LGREAMSGRILVDPEKKYVLGQPTNEKLKEYYYSDIINKKGLRIGLLASNPELYSNKRII
EAGELRGHEMHFLNIKYCYMKLDAETPEIHYRGGKVLNDFDAIIPRIRPSMTYYGCALTR
QFEALKVFTLNNAAAISQSRDKLFSLQLLLNNGVDIPTTGFANSPLDTDDLIKMVGGSPL
IVKLLEGTQGKGVVLAETKKAAESVINAFKSLNANILVQEFIKEANGKDLRLFVVDGKVV
AAMQREAAPGEFRANIHMGGTASIVKVTPEEKKIAIRAAKAMNLKVAGVDIIRSTKGPLL
LEVNSSPGLEGIEGATQKDIAGEMIKAIEKNFKWK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttagacaaagttattgtgggtagtgaagaatggtgctccttccctactttaggaatt
ccaactattaaagctcgggtagactccggagctaaaacttctgctttgcacgctgttaat
atcagaccttttcagaaagataatgaagaatgggtaaaatttgatatcaatcctattcaa
aacaatgttaaaaccgttatccattgcgaagctcctttaatagaccaacgcattgtaaaa
agctcaagtggctttcgggaaaagcgttacgttatcagaacacaattggagatcggaggc
aaacactgggaagtggaagttacactaaccaatcgcgattccatgggattccgtatgtta
ttgggtcgtgaagcaatgtccggaagaattttagtagatcctgaaaaaaaatacgtttta
ggtcaaccgacaaatgaaaagctcaaagaatattactattctgatatcatcaacaaaaaa
ggcttacgaatagggcttttagccagcaatcccgaactatacagcaataaacgcattata
gaagccggagaactgagagggcacgaaatgcactttttaaacatcaaatactgctacatg
aaactagatgccgaaactcctgaaattcattacagaggtggtaaagttttaaatgatttt
gatgccataattcctagaattcgcccaagtatgacttattacggttgtgctttaacccgt
cagtttgaggccttaaaagtatttacattaaacaatgcagcagctattagtcaatccaga
gataaattattttcattgcaactattattaaacaacggagttgacatccctaccacaggt
tttgcaaattcacctctggacactgatgatttgattaaaatggttggtggctcgccgttg
attgtaaaactattagaaggaacacaagggaaaggcgtcgttttagcagaaaccaaaaaa
gccgctgaatccgttatcaatgcatttaaaagtttaaatgctaatattttagttcaagaa
ttcatcaaggaagctaacggtaaagatctacgcttatttgtagtagacggaaaagtagta
gctgccatgcaacgcgaagcagcacccggcgaattcagagccaatattcacatgggagga
actgcttctatcgttaaagttactccggaagaaaagaaaatagccattcgggctgctaaa
gccatgaatctgaaggtggcaggtgttgacatcattcgttctaccaaaggccctttactc
ttagaagtgaattcttctccgggcttagaaggaattgaaggtgctacacagaaagatatt
gccggagaaatgatcaaagccattgagaaaaattttaaatggaagtaa
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