KEGG   Flavobacterium sediminis: DI487_15280
Entry
DI487_15280       CDS       T06625                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
fse  Flavobacterium sediminis
Pathway
fse03030  DNA replication
fse03430  Mismatch repair
fse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DI487_15280
   03430 Mismatch repair
    DI487_15280
   03440 Homologous recombination
    DI487_15280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fse03032]
    DI487_15280
   03400 DNA repair and recombination proteins [BR:fse03400]
    DI487_15280
Enzymes [BR:fse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DI487_15280
DNA replication proteins [BR:fse03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DI487_15280
DNA repair and recombination proteins [BR:fse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DI487_15280
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid AAA_22 RuvB_N AAA_14 DNA_pol3_delta_C AAA_5 AAA_30 nSTAND3 DNA_pol3_gamma3 Rad17 ResIII AAA_16 TIP49 RCF1-5-like_lid AAA_7 NTPase_1 AAA_24 IstB_IS21 DEAD AAA_18 DUF815 AAA_assoc_2 RNA_helicase Mg_chelatase NACHT AAA_28 KAP_NTPase Sigma54_activ_2 TsaE dNK NPHP3_N ORC-CDC6-like SRP54 GNAT_acetyltr_2 ABC_tran APS_kinase T2SSE
Other DBs
NCBI-ProteinID: AWM15078
UniProt: A0A2U8QYA1
LinkDB
Position
3291360..3292445
AA seq 361 aa
MEQFIVSARKYRPQTFKDVVGQKAITNTLLNAIENNHLAQALLFTGPRGVGKTTCARILA
RKINQEGYDDPNEDFSFNVFELDAASNNGVDDIRNIIDQVRIPPQTGKYKVYIIDEVHML
SQAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITINDAKEHLADIA
NEQGITFEDDALHIIAQKADGAMRDALSIFDRVVSYCGNNLTRQAVAENLNVLDFEYYIK
VTDLIIENKIPELLLAYNDILSKGFDGHHFIAGLASHFRDLLVCKNPETLTLLESGEHAQ
KLYKDQATKVSQEFLLEGIELANDCDLKYKSSQNQRLLVELCLMQLASITLNGEKKKLNP
I
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggagcaatttatagtatcggccagaaagtatcgccctcagacgttcaaagacgttgta
ggacagaaagctattaccaatacattattaaatgccattgaaaacaaccacttagcacag
gcgttgctctttaccggaccaagaggtgtcggcaaaacaacatgtgcacgtatactagcc
cgaaagatcaatcaggaaggttatgacgatccgaatgaggatttttcatttaatgttttt
gaattagatgcggcttccaataacggtgtagatgatattcgtaatattatcgatcaggtt
cgtatcccacctcaaaccggaaaatataaggtttatattatcgacgaggtccacatgtta
tcacaagcggcttttaatgcctttctgaaaacactggaagaacctcctaaacatgctatt
tttattttagcaacaactgaaaaacataagatcattccaactatcctttctcgttgtcaa
atatttgattttaaaaggattaccatcaatgatgccaaagaacatttagccgatattgct
aatgaacaaggcatcacttttgaagatgatgcactgcatattatagctcaaaaagctgac
ggtgccatgagggatgctctttctatttttgaccgtgttgtttcctattgtggcaataac
ctgacccgtcaggctgttgcagagaacttaaatgttcttgactttgaatactatattaaa
gtaacagatcttatcatcgaaaataaaattcctgaattattattagcgtataatgatatt
ttatctaaaggttttgacggacaccattttatagccggacttgcctcacatttcagggac
ttattagtttgtaagaaccctgagacgctgactctattagaatccggagagcatgcacaa
aagctgtacaaagatcaggcgaccaaagtttctcaggaatttttattagaaggaatagaa
ttagctaatgattgcgacctgaaatacaaatccagtcaaaaccagcgcttgttagttgaa
ctttgcctgatgcaattagcctccattactttaaatggagaaaaaaaaaagctaaatcct
atataa

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