Flavobacterium soyae: AABD74_06365
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Entry
AABD74_06365 CDS
T10840
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fsf Flavobacterium soyae
Pathway
fsf03030
DNA replication
fsf03430
Mismatch repair
fsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AABD74_06365 (dnaE)
03430 Mismatch repair
AABD74_06365 (dnaE)
03440 Homologous recombination
AABD74_06365 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsf03032
]
AABD74_06365 (dnaE)
03400 DNA repair and recombination proteins [BR:
fsf03400
]
AABD74_06365 (dnaE)
Enzymes [BR:
fsf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AABD74_06365 (dnaE)
DNA replication proteins [BR:
fsf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AABD74_06365 (dnaE)
DNA repair and recombination proteins [BR:
fsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AABD74_06365 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
WYZ21081
LinkDB
All DBs
Position
1426752..1431290
Genome browser
AA seq
1512 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDSDNWPRCIQIAWQLHDEMGQLIEHQDYLVKPEGFNIPY
DAERIHGISTELAEADGISLAEVLEKFNIALSKTKFIVGQNLGFDVNIMGAEFHRMGVES
QMSSMPVLDTCTEVTASLLQLPGGRGGKFKLPTLTELHSYLFDQPFAEAHNATADVEATT
RCFLELVRREVFTKEELDVPKDYFKEFQERNSEPFKLIGLKHINLKAASDKIREQLKALQ
VDDKQTTVSESDKADFKAAKFAHLHNHTQFSVLQSTIGIGNIVAAAAKNGMPAVAMTDTG
NMMGAFHFVSAVMNHNKAASGKNKALVEAGEEPTETEVKPIVGCEFNICENHLDKSKKDN
GYQVVLLAKNKAGYHNLAKMASIAYTDGFYYVPRIDRAIVEKYKEEIMVLSGNLYGEIPS
KILNIGENQAEEALVWWKEQFGDDFYLEIMRHNQEDENRVNKTLIEFSQKHNVKLIATNN
TYYLNKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSEEEMKKLFSDLPE
AIINIQEIIDKVEGYSLYRDVLLPKFDIPDEFIVPEDEEDGGVRGENKYLRHLTMEGAKR
RYGEITESIQERLDFELLTISNSGYPGYFLIVQDFIAEARKMDVSVGPGRGSAAGSAVAY
CLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVINKYGQKQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPGMMPSKWNLARFISESEEEVKKALRSDE
FDNVKELIAIANEDDLAGETIQQAKILEGSMRNTGIHACGVIITPSDITNYVPVTTAKDS
DLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRTGIDLDPDTFPIDDEETYA
LFQRGETVGIFQYESPGMQKYMKDLKPTVFGDLIAMNALYRPGPLEYIPSFVRRKNGDEE
IKYDLDACAEYLSETYGITVYQEQVMLLSQSLAGFTKGEADVLRKAMGKKQKDVLDKMKP
KFVEQAAEKGHDAKILEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAA
VLSNNMNDIKQVSFFMEECKRMGLQVLGPDVNESYYKFTVNDNYAVRFGMGAIKGVGSGA
VETIVENRKDGRYKSIFDLAKRIDLRAANKKAIENLALAGGFDSFEGTTRAQYFHDDGDG
ITFYEKAMRYGSKFQENENSSQVSLFGETSEVQIAEPVVPPCEDWSTMEKLAKEKEVVGI
YISGHPLDDFRFEMKYFCNARLEVLKSMNEYVGKNLNFAGIINNVQHRVAKNGKGWAVFN
LEGYDESYEFKIFGEEYLKFRHFLIQNNFAYLKILIKDGWVNHDTGKKSDPRMQFVEVRQ
LQDILEAFAKKLILLLDIKDLQTEFIHRLSQLFNENKGDNSVSFEIMEIENVKRLVEVET
TSEFEGNDDAVFEDVNEDNETVAGEAKMQEVKEVEEVKVVTKLTMPSRRLKVRICTELLQ
ELEKMQVNFKLN
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatattcgataccgaaacaactggattaccaaagcgttgggatgcaccaatt
actgattctgataactggccccgctgtattcagattgcgtggcagcttcatgacgaaatg
ggacagcttattgagcatcaggattatttggtaaaaccagaaggatttaatattccgtat
gatgctgaacgtattcacggaatctctactgaattggctgaagccgatggaatctcgctg
gcagaagttttagagaaattcaatatcgctttaagtaaaaccaaatttattgttggacag
aatttaggtttcgacgttaatattatgggtgccgaattccatagaatgggagtagagtct
caaatgagttcaatgccagttttggatacctgtactgaagttacggcttcattattacag
cttcccggaggtcgtgggggaaaattcaaacttccaactcttacggaattacacagctat
cttttcgaccagccttttgcggaagcgcacaatgcaactgccgacgttgaggcaactacg
cgttgtttccttgagttggttagaagagaagtttttacaaaagaagaattagacgttccg
aaggattatttcaaagaatttcaggaaagaaattcagagccgtttaagcttattggttta
aaacatatcaacttaaaagcagcttctgataaaatcagagaacagcttaaagctttgcaa
gttgacgataaacaaactaccgtttcagaatctgataaagcagattttaaagcagcaaaa
tttgcacatttacacaatcatacacagttttcggttttgcaatcgactatcggaattgga
aatattgtggcagctgcagccaaaaacggaatgccggccgttgccatgaccgatacggga
aacatgatgggggcttttcactttgtgagcgccgttatgaaccacaacaaagcagcatct
ggaaaaaataaagctttggttgaagcgggagaagagccaaccgaaactgaggtaaaacca
attgtaggctgcgagtttaatatttgtgaaaaccatttagataaaagtaaaaaagacaac
ggttatcaggttgttttgctggctaaaaacaaagcaggttatcataatctggccaaaatg
gcttcgattgcctacactgatggattttattatgtgccgaggattgaccgtgcgattgtt
gaaaaatacaaagaagagatcatggttttgtctgggaatttatatggagaaattccaagt
aaaatcctgaacattggtgaaaaccaagctgaagaagctttagtttggtggaaggaacaa
tttggcgacgatttctatttggaaataatgcgccacaatcaggaagacgaaaaccgtgtc
aacaaaaccctgattgaattttcgcaaaaacacaatgtcaaattaattgcgacaaataat
acctattatttaaataaagaagatgccaatgcacacgatattttactttgtgtaaaagac
ggagaaaagcaggcaacacccatcggacgcggacgtggttatcgttatgggcttccaaat
caggaatattatttcaagtcagaagaggagatgaaaaaactcttttctgacctgcccgaa
gcaattatcaacattcaggaaattattgataaggtcgaaggatattcgctttaccgagat
gtattgcttccaaaatttgatattcccgacgaatttatagttcctgaagatgaagaagac
ggtggtgtaagaggggaaaataaatacttgcgacaccttaccatggaaggtgctaaaaga
cgttatggcgaaattaccgaatcaattcaggagcgtttggattttgaattattgacgatt
tcgaattcaggatatccgggttactttttgattgttcaggatttcattgccgaagcaaga
aaaatggacgtttcggtaggtcccggtcgtggatctgcagcgggttcagccgttgcgtat
tgtctaggaattaccaatattgaccccattaaatacgatttactttttgagcgtttccta
aatcctgaccgtgtatcgatgcccgatattgatatcgactttgatgatgagggtcgtgga
cgtgtaatggattatgtaattaataaatatggtcaaaaacaggtagcacagattatcact
tatggtaaaatggcaaccaaatcggcaattcgtgatacggcgcgtgtactggatttacca
ttgtttgaagctgatagaattgcaaaactgattccgggaatgatgccgtcaaaatggaat
ttggcgcgttttatttctgaaagcgaagaggaagtaaaaaaagcacttcgttcggacgaa
tttgataatgtaaaagaattaattgccattgccaacgaagatgatttggcaggagaaacc
attcagcaggcaaaaatccttgaaggatcgatgcgtaatacgggaattcacgcttgtggg
gttatcattacgccatcggatattacgaattacgttcctgttacaacggcaaaagattct
gatttatatgtaacacagtttgataactcggttgcagaaagtgccggactgcttaaaatg
gacttcctgggtctgaagacccttacgctgataaaagataccgttaaactggtaaaatac
agaacaggaattgatttggatccagacacgtttccaattgatgacgaagaaacgtatgca
cttttccaaagaggtgaaacggttggaatcttccaatacgagtcacccggaatgcagaaa
tacatgaaagatctaaagccaacggtttttggagatttaattgccatgaatgccttgtat
cgtccgggacctttggagtatattccgtctttcgttcgaagaaaaaacggtgacgaagaa
atcaaatacgatttagacgcctgtgccgaatatctatcagaaacctacggaattacggtt
taccaggagcaggtaatgcttttgtctcagtctttggcaggatttacaaagggtgaggcc
gacgttttgcgtaaagcgatgggtaagaaacaaaaagatgtactggataaaatgaagcct
aagtttgtggagcaggcggcagaaaaaggtcacgatgccaaaattctggagaaaatctgg
aaagactgggaagcttttgcgagttacgccttcaacaaatcgcactcgacttgttatgcg
tggattgcgtatcaaaccgcttatttaaaagctcattatccggcagaatatatggctgcg
gttctttcgaataatatgaatgatatcaaacaggtttcattttttatggaagaatgtaaa
cgtatgggattacaggttttaggtccagacgtaaacgaatcgtactataaatttacagta
aacgataattatgccgttcgttttggaatgggtgctattaaaggtgttggttccggagcc
gttgaaacaatcgtagaaaacagaaaagacggaagatataaatccatttttgatttggcg
aaacgaatcgatttgcgtgcagccaataaaaaagcaattgaaaacttagcacttgccgga
ggatttgattcttttgaaggaactacaagagcgcaatatttccatgatgatggcgacgga
attacattttacgaaaaagcgatgcgttacggatcgaaatttcaggaaaatgaaaattca
tcgcaagtaagtttatttggagaaaccagcgaagtgcagattgcagaaccggttgtaccg
ccatgtgaggactggagtacaatggaaaaactagctaaggaaaaagaggtggttgggatt
tatatttccggacatccgcttgatgattttagatttgagatgaaatacttctgcaatgcc
cgattagaagtgttgaaaagcatgaatgaatatgtaggtaaaaatctaaactttgccgga
atcattaacaatgtacagcatcgtgtagccaaaaacggaaaaggctgggctgtatttaat
ctggaaggatatgacgagagttatgagtttaaaatttttggtgaagaatatttaaaattc
cgccatttcctgattcagaataatttcgcctacttaaaaatattgataaaagatggctgg
gtaaatcatgatacaggtaaaaaatcagatccaagaatgcagtttgttgaggtgcggcaa
ttgcaggatattctggaagcatttgctaaaaaactgattcttttattagatatcaaagat
ttacaaactgaatttattcatagattaagccaactgtttaatgaaaacaaaggagataat
tctgtaagttttgagattatggaaatcgaaaatgtaaagcgtttagttgaggttgaaacc
accagtgagtttgaaggaaatgatgatgccgtttttgaagatgtaaatgaagataacgaa
actgttgccggagaagctaaaatgcaggaagtaaaagaagtcgaagaagtaaaagtcgta
acaaaattaacgatgccaagcagaaggttaaaagttaggatttgtactgaacttcttcag
gaattagagaaaatgcaggtaaatttcaaactgaattaa
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integrated database retrieval system
