Flavobacterium soyae: AABD74_07885
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Entry
AABD74_07885 CDS
T10840
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fsf Flavobacterium soyae
Pathway
fsf03030
DNA replication
fsf03410
Base excision repair
fsf03420
Nucleotide excision repair
fsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AABD74_07885 (polA)
03410 Base excision repair
AABD74_07885 (polA)
03420 Nucleotide excision repair
AABD74_07885 (polA)
03440 Homologous recombination
AABD74_07885 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsf03032
]
AABD74_07885 (polA)
03400 DNA repair and recombination proteins [BR:
fsf03400
]
AABD74_07885 (polA)
Enzymes [BR:
fsf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AABD74_07885 (polA)
DNA replication proteins [BR:
fsf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AABD74_07885 (polA)
DNA repair and recombination proteins [BR:
fsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AABD74_07885 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AABD74_07885 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WYZ21374
UniProt:
A0ABZ2UM44
LinkDB
All DBs
Position
complement(1782264..1785116)
Genome browser
AA seq
950 aa
AA seq
DB search
MSTQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFMNSLLDVIKREKPDHLAV
AFDKGGSHVRTEMFVEYKANRDATPEAIKIAVPYIQELLRAMHIPIIEVEGCEADDLIGT
IAKQAEKQNYKVFMVTPDKDFAQLVSENIFMYKPARMGNGIEIWGIPEVLAKFEIERPVQ
VIDFLGMMGDAVDNIPGLPGVGEVTAKKFLKEFGTMENLLENTHLLKGKMKENIEANKDK
GLLSKKLATIICDCDVIFNEDDYELSRPDIEKTDAIFQELEFRRMAEQFDNLFKVGGGNE
LANNNPAAEAKLYKKPQPKNEDQFDLFGGGGTTLDESAEAARNSFYNTLENTEHSYQTVQ
GDLGIKLLLQNLQKQTSVCFDTETTGIDALHAELVGMSFSYEKGKAFYVPFPENQEEAKV
LVDKFVPFFENENIEKIGQNLKYDLKILSNYGVTVKGKLFDTMIAHYLINPDMRHNMDIL
AETYLKYSPKSIETLIGKKGKNQLSMRDVPLEDIKEYAAEDADVTLQLKEIFTTELDKTE
TKKLFDEIEIPLVSVLAAMETEGIRLDVDFLKEMSKEMEVEIKSLEEQIYETAGEKFNLA
SPKQLGDILFDKLKIGGAKQKKTKTGQYATGEEVLTYLANDNPIVKQILDWRQMVKLQST
YILALPEQVDKTTLRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFVARDEN
YTLVSADYSQIELRIIAALSGEENMIKAFQNGEDIHRATAAKVFDVALEEVSREQRSNAK
TVNFGIIYGVSAFGLSNQTSLSRSESAALIDAYYKTYPRLKSFIQEQVEFAREKGYVQTI
SGRRRYLKDINSANAVVRSAAERNAVNAPIQGSAADVIKIAMINIHKKLQDENWKSKMLL
QVHDELVFDVHNDELEKIQPMIKHEMENAFKMTVPLEVELGLGKDWLEAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcaaaaacgcctttttcttctagatgcttatgcattaatttttcgcggttat
tatgcttttataaaaaacccgagaatcaactcaaaaggaatggacacatctgcaattatg
ggtttcatgaactcacttttggatgttattaaaagagaaaaaccagatcatttggccgtt
gcttttgacaaaggcggaagtcatgtaagaacagaaatgttcgtagaatataaagctaat
cgtgacgcaacgcctgaggcaattaaaattgctgttccgtatattcaggaattgttaaga
gcaatgcatattccgataattgaagtcgaaggctgtgaagccgatgatttaattggaacc
attgccaaacaagccgaaaaacaaaattataaggtttttatggtaacaccggataaggat
tttgcgcaattggtttctgaaaatattttcatgtacaaacctgcccgtatgggtaatgga
atcgaaatttggggaattcctgaagttttggcaaaattcgaaatcgaaagaccagtccaa
gtaattgattttcttggaatgatgggcgacgctgtagataatattccaggattaccggga
gttggtgaagtgaccgctaagaagttcctgaaagaatttggtacaatggagaatctttta
gaaaacactcatttactaaaaggaaaaatgaaggagaatatcgaagccaataaagacaaa
ggtcttttgtctaaaaaactggcaacgattatctgcgactgtgatgttatttttaatgaa
gatgactatgagctttctcgccctgatattgaaaaaacagatgctatttttcaggaattg
gaatttagaagaatggctgagcagtttgacaacttgtttaaagttggcggcggaaatgaa
ttagcaaacaataatccggctgccgaagctaaattatacaaaaagccacagccaaagaac
gaagaccaatttgatctttttggcggaggtggaactactcttgatgaaagtgccgaagct
gcaagaaattcgttttataatactttagaaaatactgaacattcttatcaaaccgtacag
ggcgatttaggaattaaattgcttttacaaaatttacaaaagcagacttcggtttgtttt
gatactgaaacaactggaatcgatgccctgcatgcagaacttgtgggtatgtctttctct
tacgaaaaaggaaaagctttttatgttccgtttccggaaaatcaggaagaagcaaaagtt
ttagtagacaagtttgttccgttttttgaaaatgaaaacatcgaaaaaattggacagaat
ttaaaatacgatttaaaaattctttctaattatggtgttacagtaaaaggaaaacttttt
gacacgatgattgcgcattatctgattaatccggatatgcgtcataatatggatatttta
gccgaaacatatttaaaatattctccaaaatcaattgaaactttaattggtaaaaaagga
aaaaatcagctttcgatgcgcgatgttcctttagaagatattaaagaatatgctgctgaa
gatgctgatgttactttacaattaaaagaaatctttacaacagaattagacaaaaccgaa
actaaaaagttatttgatgaaatcgaaattccgttagtaagcgttttggccgcaatggaa
acagaaggaattcgtctggatgttgatttcttaaaagaaatgtctaaagaaatggaagtt
gaaatcaaatctttagaagaacaaatttacgaaacagcaggcgagaaatttaatcttgcc
tccccaaaacaattaggagatattttatttgacaaacttaaaattggcggagcaaagcaa
aagaaaaccaaaacgggccaatatgcaaccggagaagaagttttgacttatttagcaaac
gataatcctattgtaaaacaaattttggactggcgccaaatggtaaagttacaaagtacc
tatattttggctttgccagaacaagttgataaaacaacattgcgtgttcataccgattat
atgcagactgttgccgcaacaggacgtttgagttctaataatccgaacttgcaaaacatt
ccaattcgtactgaaagaggccgacaaattcgtaaagcttttgtggcgcgtgatgaaaat
tacactttagtttctgccgattattctcaaatagaattgcggattattgcagctttaagc
ggtgaagaaaacatgattaaggcgtttcaaaatggagaagatattcacagagctaccgca
gcaaaagtttttgatgtggcgctagaagaagtttcccgcgaacaaagaagtaatgccaaa
acggtaaacttcggaatcatatatggtgtttctgcttttggattaagtaaccagacttct
ctatcaagaagcgaaagcgctgcattaattgatgcttattataaaacatatccaagatta
aagtcttttattcaggagcaagttgaatttgcccgagaaaaaggatacgtacaaaccatt
tctggtcgccgtcgttatttaaaagacatcaattctgccaatgctgttgttagaagcgct
gcagaacgaaatgctgtaaatgcaccaattcagggaagcgctgccgatgtaattaagatt
gcaatgatcaacattcacaaaaaattacaagacgaaaactggaaatccaaaatgctactc
caggttcatgatgagcttgtgtttgatgtacacaacgatgaattagaaaaaatccagcct
atgattaaacacgaaatggaaaatgcttttaaaatgacagttccgttagaagttgaactt
ggattgggtaaagattggctggaagcgcattaa
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