Flavobacterium soyae: AABD74_09060
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Entry
AABD74_09060 CDS
T10840
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fsf Flavobacterium soyae
Pathway
fsf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fsf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AABD74_09060 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsf03019
]
AABD74_09060 (groL)
03110 Chaperones and folding catalysts [BR:
fsf03110
]
AABD74_09060 (groL)
03029 Mitochondrial biogenesis [BR:
fsf03029
]
AABD74_09060 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fsf04147
]
AABD74_09060 (groL)
Enzymes [BR:
fsf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AABD74_09060 (groL)
Messenger RNA biogenesis [BR:
fsf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AABD74_09060 (groL)
Chaperones and folding catalysts [BR:
fsf03110
]
Heat shock proteins
HSP60 / Chaperonin
AABD74_09060 (groL)
Mitochondrial biogenesis [BR:
fsf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AABD74_09060 (groL)
Exosome [BR:
fsf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AABD74_09060 (groL)
Exosomal proteins of other body fluids (saliva and urine)
AABD74_09060 (groL)
Exosomal proteins of breast cancer cells
AABD74_09060 (groL)
Exosomal proteins of colorectal cancer cells
AABD74_09060 (groL)
Exosomal proteins of bladder cancer cells
AABD74_09060 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
WYZ21602
LinkDB
All DBs
Position
complement(2057894..2059525)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPTVTKDGVSVAKEIE
LKDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLAKQAKVVGSDSDKIKQIASISANNDEVIGELIAAAFAKVGKEGVITVEEA
KGTDTFVDVVEGMQFDRGYLSPYFVTNPEKMEVELDSPYILLYDKKVSSLKELLPVLEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYTLENTTIEMLGNAKRVSIDKDNTTIVSGAGEADIIKNRVNQIKGQMETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKAVLAKLNADNADEATGIQIVSRAVESPLRTIVENAGLEGSVVVAKVGEGSGDFGYNA
KTDEYVDMLKAGIIDPKKVTRVALENAASVSGMILTTECALIDIKEESAGGGMPMGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgtgacggattaaaacgtggtgttgat
gcattagcaaatgctgtaaaagtaacgcttggaccaaaaggtcgtaatgtaattattgga
aaatcatttggtggaccaacggttactaaagatggtgtttcggttgcaaaagaaatcgaa
ttaaaagacccattagaaaatatgggcgctcaaatggttaaagaagttgcttctaaaacc
aatgatttagcgggtgacggaactacaactgctacagttttagctcaggcaatcgtaaaa
gaaggtcttaaaaacgttgctgccggtgcaaatccaatggatttgaaacgcggaatcgat
aaagcagttgaagctatcgttgctgacttagcaaaacaagctaaagttgttggaagtgat
tctgacaaaatcaaacaaattgcttctatctctgcaaataacgacgaagttattggtgaa
ttgattgctgcggctttcgctaaagttggaaaagaaggagttattactgttgaagaagct
aaaggaactgatacttttgttgacgttgttgaaggaatgcagtttgacagaggatatctt
tctccatactttgtaacaaacccagagaaaatggaagttgaattagactctccatacatt
ttattatacgacaaaaaagtatcttctttaaaagaattattaccggttttagagccagta
gcacaatccggaaaaccattattgattattgctgaagatgttgacggagaagctctttca
actcttgtagtaaacaaattaagaggcgctcttaaaattgctgctgtaaaagctcctggt
tttggagacagaagaaaagcaatgttagaagatatcgcaatcttaactggtggaactgta
atttctgaagaaagaggatatactcttgaaaatacaactatcgaaatgttaggaaacgca
aaaagagtttctatcgataaagacaatacaactatcgtaagcggtgctggtgaagcagat
atcatcaaaaacagagtaaaccaaattaaaggtcagatggaaactacaacatctgattat
gataaagaaaaattgcaggagcgtttggctaaattagccggtggtgttgctgttctttat
gttggtgcagcttctgaagttgaaatgaaagagaaaaaagacagagttgatgatgcatta
cacgcaactcgtgctgctgttgaagaaggaattgttgctggcggcggcgttgctttatta
agagcaaaagctgttttagctaaacttaacgctgataatgctgacgaagcaactggaatc
cagattgtttctcgtgcagttgaatctccattaagaacaattgtagaaaatgctggtctt
gaaggttctgtagttgtagcaaaagtaggtgaaggttcaggtgattttggatacaacgct
aaaactgacgaatatgtagatatgcttaaagctggaattatcgatcctaaaaaagtaact
cgtgtggctcttgaaaatgctgcatctgtttctggaatgatcttaactacagaatgtgca
ttaattgatattaaagaagaaagtgccggaggcggaatgccaatgggcggcggtatgcca
ggaatgatgtaa
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