Flavobacterium soyae: AABD74_12395
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Entry
AABD74_12395 CDS
T10840
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
fsf Flavobacterium soyae
Pathway
fsf03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
fsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AABD74_12395 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AABD74_12395 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
UvrA_DNA-bind
AAA_21
AAA_29
AAA_16
nSTAND1
nSTAND3
RsgA_GTPase
DnaJ_CXXCXGXG
Viral_helicase1
AAA_18
AAA_22
NACHT
AAA_33
cobW
T2SSE
Anti-TRAP
NTPase_1
DGKD_4H
Motif
Other DBs
NCBI-ProteinID:
WYZ17958
LinkDB
All DBs
Position
complement(2890071..2892866)
Genome browser
AA seq
931 aa
AA seq
DB search
MQIDLSTLDPKQNIIIKGAQVHNLKNVDVAIPRNKLVVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSSYARQFLGRLDKPKVEYIKGIAPAIAIEQKVNTTNARSTVGTSTEIYDYIKL
LFARIGRTYSPVSGQEVKKNTVTDVVSDVKTLEIDSRWLLLAPIHLEEGRQLEDKLKILL
QQGFARILVDNEMVRLDEFTPTELHKLDNKDILLIIDRIVVKEEEEFYNRLSDAVQTAFF
EGKGICYLQEAGSEKRFSYSNNFELDGITFLEPNVHLFSFNNPYGACPVCEGYGNIIGID
TDLVVPNTSLSVFQSAIYPWRGESMSWYKDELVKHAYKFDFPIHKPYFELSEDQKDLIWK
GNQYFQGLNDFFKELEEKNYKIQNRVMLSRYRGKTKCHACRGKRLREEASYVKVNGKTVS
DLVDLPIRHLVTFFKNIELNVYEQQIAKRLMVEINNRLSFLTEVGLDYLTLNRNSATLSG
GESQRINLATSLGSSLVGSMYILDEPSIGLHPKDSERLIKVLLSLRDLGNTVIVVEHDED
IMKAADMIIDIGPEAGTFGGKLVAQGTYAEILKSDSLTSKYLNGDLEISVPKKRRKFKNH
IDIIGARENNLKNINVTFPLDVLTVVTGVSGSGKSTLIKKILFPAMQKKLENAAEKAGQF
SEISGSFSQIKHIEYVDQNPIGRSSRSNPVTYIKAYDDIRDLYAKEKLSKIRGYQAKHFS
FNVDGGRCETCKGEGSINVEMVFMADVSLPCETCGGKRFKKEILEVTFDNQNINDVLTMT
IDDAIAFFEKNKQTKITQKLQPLQDVGLGYVQLGQSSSTLSGGEAQRIKLASFLVKGATK
DKALFVFDEPTTGLHFHDIKKLLASFDALIEKGHSIIVIEHNLDLIKCADWILDLGPEGG
ENGGHLLAAGTPEDVVKIKESVTGIYLKDKL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattgatctttctacactcgacccgaagcaaaatattataataaaaggcgcacag
gtacataatttaaaaaatgtagatgttgccattccgagaaacaaacttgtagtaattaca
gggctttcgggatcagggaaatcaagtttagcttttgatactttatatgccgaagggcag
cgccgatatgttgaaagtttatcatcatacgcgcgtcagtttttagggcgtttagacaaa
ccgaaagtagaatacataaaaggaattgcgcctgcaattgcaattgagcagaaagtaaat
acaacaaatgctcgttcgactgtaggaacttctaccgaaatctacgattatattaaactt
ttatttgccagaattggaagaacatattcgccagtttctggtcaggaagtcaaaaaaaat
accgttacagatgtcgtttctgatgtaaaaacacttgaaatcgacagtcgatggcttttg
ctcgctcctattcatttagaagaaggccgtcagcttgaagataaacttaaaatacttttg
cagcaaggttttgcccgtattttagtcgataacgaaatggttcgtttagatgaatttacc
ccaacagaactacataaactggataataaagatattttattaatcattgaccgtattgta
gttaaggaagaagaagagttttacaatcgcctttctgatgccgtacagactgcctttttt
gaaggaaaaggaatttgttaccttcaggaagcaggttcagaaaaaagattttcttattct
aacaatttcgaattagacggaattacattcttggaaccaaacgtacatttatttagtttt
aataatccatacggagcttgtccggtttgcgaaggctacggaaatattattggaattgat
actgatttggttgtgccgaatacttcattatccgttttccaaagtgcgatttatccttgg
cgcggcgaaagtatgagctggtataaagatgaattagtaaaacatgcttataaattcgat
ttcccaattcataaaccttattttgaactttcagaagatcaaaaagacttaatctggaaa
ggaaatcaatattttcagggtttgaacgatttctttaaagaacttgaagaaaaaaattat
aaaatacaaaatcgtgtcatgctttcgcgttaccgcggtaaaacgaaatgccacgcctgt
cgtggaaaacgtttacgcgaagaagcttcatatgtaaaagtcaatggaaaaacggtttca
gatttagtcgatcttccgattagacatttggttactttctttaaaaatatcgaattgaat
gtttacgaacagcaaattgccaaacgtttgatggttgagattaataatcgtttgtccttt
ttgacagaagttggtttagattatctaacattaaaccgaaattcagctacactttccgga
ggagaatcgcagcgtattaatcttgctacttcattaggaagcagtttggttggttcgatg
tatattctggacgaaccaagtattggtcttcacccaaaagattcagaacgattgattaag
gttttactttctcttcgtgatttaggaaatacggttatcgtagtagaacacgacgaagat
atcatgaaagctgccgatatgattattgatattggcccagaagccggaacttttggagga
aaactagtggcacagggaacttatgcagaaattttaaaatcagattcgcttacttcgaaa
tacctgaatggcgatttagaaatttctgttccaaagaaaagacgaaaatttaaaaaccat
attgatattattggtgccagagaaaataaccttaaaaatattaatgttacttttcctctt
gatgttttaaccgttgtgacaggagtttcaggaagcggaaaaagtacactgattaagaaa
attttatttcctgccatgcagaaaaaactggaaaatgctgctgaaaaagcggggcagttc
agtgaaatatcaggttctttttctcagatcaaacatattgaatatgttgaccaaaatcca
attggaagaagttcgagatcaaatcctgtaacatacattaaagcttatgatgacattcgt
gatttgtatgcgaaagaaaagttatcgaaaataagaggatatcaggctaaacatttttct
tttaatgttgatggaggccgctgcgaaacttgtaaaggagaaggctcaataaatgttgaa
atggtttttatggccgatgtttcgctgccttgtgaaacctgcggcggaaaacgatttaaa
aaagagattctcgaagttacttttgataatcaaaacatcaacgatgttctaaccatgaca
attgatgatgcaattgcttttttcgaaaaaaataagcagactaaaatcactcaaaaacta
cagccactgcaagatgttggtttaggatatgttcaattaggacaatcgtcctctactctt
tccggtggtgaagcccagcgtattaaattggcctcatttttagtaaaaggagcaacaaaa
gataaagctttgtttgtttttgatgaacctacaacaggattgcattttcatgatattaaa
aaattattggcctcatttgatgccttaatcgaaaaaggacattcgataattgtaattgag
cacaacttagatttaataaaatgtgcagactggattttagatctaggccctgaaggcggt
gaaaatgggggacatttattagccgcaggaacacccgaagatgttgttaaaatcaaggaa
tctgttacaggaatttatttaaaagataaattataa
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