Flavobacterium soyae: AABD74_13030
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Entry
AABD74_13030 CDS
T10840
Name
(GenBank) pectate lyase-like adhesive domain-containing protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fsf Flavobacterium soyae
Pathway
fsf00040
Pentose and glucuronate interconversions
fsf01100
Metabolic pathways
fsf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AABD74_13030
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AABD74_13030
Enzymes [BR:
fsf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AABD74_13030
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
WYZ18082
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Position
complement(3026057..3027172)
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AA seq
371 aa
AA seq
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MKLQSTLSMFLLTLTFGFTACNTEEIASPNEEASIKTTNEVQSGSTNLTAKIGNCSEVPG
WASQNGSTTGGGSSAETTVTTYAQLKSAIENSSVKVIKVSGTITVTTRLSFQDQTGKTIY
GASGAKLVSTNQTKDASGIISIKRCKNLIIRNLIFEGPGAYDTDGWDNAVLDDCQNVWVD
HCEFRDGVDGNFDIKNKSDYITVSYTKFGYLKPPKAGGSGGTDDHRYSNLIGSSDGATAD
RGKLRITFARCWWAPGCRERMPRVRFGKVHLVNNFYNSTVSNKCVAAGFEADIRVESNVF
EGVKTPIELMSGYTAVTAADNVFTNTTGNQAGSGTAFTPPYSIIKLSKTAVKADISANAG
ATLGGNTCGSF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacaatcaacactttcaatgtttttactaacattgactttcggttttacggca
tgtaacactgaagaaattgcttccccaaatgaagaagcaagtatcaaaacaacaaatgaa
gttcagtcaggttcgacgaatttaactgcaaaaattgggaactgctctgaagttccggga
tgggcttctcaaaacggaagtacaaccggtggtggctcttcggctgaaactactgttact
acttatgctcaattaaaatctgctatcgagaacagctcagtaaaagtcatcaaagtttcc
ggaactattacagttaccacaaggttgtcatttcaggatcaaaccggtaaaacaatttat
ggtgcgagcggcgcaaaactggtttcgactaaccagactaaagatgcttctggtattatc
agtatcaaaagatgtaaaaacctgatcatcagaaatcttatttttgaaggtccgggagct
tacgatactgatgggtgggacaatgcagttttggacgactgtcaaaatgtatgggtagac
cactgcgaatttagagatggtgttgacggaaacttcgacatcaaaaacaaatcagattac
atcacggtttcgtataccaaatttgggtacttaaaaccaccaaaagctggaggttctggc
ggaactgacgatcacagatattcaaacttaattggttcaagtgatggtgctactgcagat
cgcggaaaattgagaattacttttgcaagatgttggtgggctcccggatgcagagaaaga
atgccaagagttcgttttggaaaagtacatttggttaataacttctacaacagtactgtg
agcaacaaatgtgttgccgctggttttgaagctgatattcgtgtagaaagcaacgttttt
gaaggtgtaaaaacacctattgaattaatgagcggctatactgctgttaccgcagctgat
aacgttttcacgaatacaaccggaaatcaagccggaagcggtactgcttttaccccgcca
tattctattataaaacttagcaaaacagctgttaaagcagatatttcggctaatgcagga
gcaactttaggcggtaatacctgcggttcgttttaa
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