Flavobacterium soyae: AABD74_15045
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Entry
AABD74_15045 CDS
T10840
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fsf Flavobacterium soyae
Pathway
fsf00040
Pentose and glucuronate interconversions
fsf01100
Metabolic pathways
fsf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AABD74_15045
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AABD74_15045
Enzymes [BR:
fsf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AABD74_15045
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
WYZ18479
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Position
complement(3524507..3525628)
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AA seq
373 aa
AA seq
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MKIKSTITVFLLTLAFGFTACNTEEIASPQNDESSILATTTTGSGLIAKEGNCDDVPGWA
SQNGGTTGGGTAEETVVTDYAQLKAALQNATVKVIKVSGTITIPAITGGRLSFKDQTGKT
LYGESGAKLVSTDQTKSNSGIMNISRCKNIIIRNLIFEGPGAYDTDGWDNAVLDDCQNVW
IDHCEFRDGVDGNLDFKNKSDFITVSYTKFQYLKAPKAGGPGGSNDHRFSNLIGSSDTQT
TDRGKLSITFARCWWGNGCKQRLPRVRFGKVDIVNSYFNCEGNDVCVAAGFEANIRIEES
VFENVNTPIDLSATFTAVSSIHNAFLNTTGNREGKNTAFTPPYTMLTLKNDEVKADITSR
AGATINGNICGSF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaatcaacaatcacagtgttcctactaacactggcattcggttttacagca
tgtaacactgaagaaattgcttcacctcaaaatgacgaaagcagtattttagcaacgact
actacaggaagcggcctgattgccaaagaaggaaactgtgatgatgttcccggatgggcg
tcacaaaacggtggaacaaccggaggaggaactgcagaagaaactgtagtaactgattat
gctcaattaaaagcagcccttcaaaatgccacagtaaaagtaattaaagtatctggtacc
attaccattcctgctattaccgggggaagactttcgtttaaagaccaaacaggaaaaacc
ctgtatggtgaaagtggagcgaaattggtatcaactgatcaaacaaaatccaattccgga
attatgaacatttctcgttgcaaaaacatcatcattagaaaccttatttttgaaggacca
ggagcttatgatacagatggttgggacaatgcagtacttgacgattgtcaaaacgtatgg
attgatcactgtgaattcagagacggtgtagatggtaacttagattttaaaaacaaatca
gattttattaccgtgtcttatactaaatttcagtacttaaaagcaccaaaagctggtgga
ccaggcggatcgaatgatcatcgtttttctaacctgattggttccagcgatacacaaact
actgatagaggtaaattgagtataacttttgcaagatgttggtggggtaatggttgtaag
caaagactgccaagagttcgttttggtaaagtagacatcgtcaatagctattttaattgt
gaaggaaacgatgtatgtgttgctgctggttttgaagctaatatccgtatagaagaaagc
gtttttgaaaatgtaaacacacctatcgacttatctgcaacttttactgctgttagttct
atccataatgcttttcttaatactacaggaaatagagaaggaaaaaatacagcttttaca
cctccgtatacaatgttaacattaaagaatgacgaagttaaagcagatattactagtaga
gctggtgctaccattaacggtaatatttgcggttctttttaa
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