Frateuria soli: LQ771_00665
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Entry
LQ771_00665 CDS
T08854
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fsg
Frateuria soli
Pathway
fsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LQ771_00665 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsg03400
]
LQ771_00665 (recD)
Enzymes [BR:
fsg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LQ771_00665 (recD)
DNA repair and recombination proteins [BR:
fsg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LQ771_00665 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
RecD_N
AAA_16
UvrD-helicase
SLFN-g3_helicase
PhoH
AAA_5
AAA_28
Mg_chelatase
NTPase_1
DEAD
nSTAND3
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
UGB38407
LinkDB
All DBs
Position
155647..157473
Genome browser
AA seq
608 aa
AA seq
DB search
MSAYRFQRNPAELADTPWRPLDRALLRWTLAHGGSPLVARLAAWTSFADGEGDTALPLAG
EQAGRHGAPVLSPDELAAVRSDPLVSDGSAPAPFVLDAHDRFYLWRNHADEVAVAQQLRA
RREAGSSAMAADEGTVDELFGGVRSKSVARQRQAVAQVGGRRLFVLTGGPGTGKTTTVLR
MLLMLQHLGPDRVPTIQVGAPTGKAAQRLVQSLRQGKQALQASLPDAWRPRLERIPDSEA
LTLHRMLAYDPRRNRFGRNAAHPLAADIVVVDEASMIDLALLRALLEAVRPEATLVLVGD
ADQLTSVAAGSVLMDVVAVMEAEGASDIVRLEHSFRAQQQLVAVNRAVRAGDAAALREAV
AHAGEHARWMQVDDATQLRHELLGWIGELGRLPIRPVLPPHLAGLEEVGAERGTLALQAL
HALARRQLLCALREEGFGALALNDWIEQRLKQAWGVPEDRAWYPGRAVLITRNDYATRLY
NGDVGLCLADAGGALRVWFETTTADGQPSARSFAPGTLPAHEGAFAITIHKSQGSEYEEV
AVLLPPDPQSRILSRQLLYTGLSRARKTVLLWSSGAALDTSLTRPVRRAGGLADRLASPG
EPQQLTLL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctaccgcttccagcgcaaccccgcggaactggccgacacgccatggcgcccg
ctcgatcgcgcgctgctgcgctggaccctggcgcacggtggctcgccgctggtcgcgcgc
ctggccgcctggaccagcttcgccgacggcgagggcgacacggcgctgccgctggctggc
gagcaggccgggcgccacggtgcgccggtgctctcgcccgacgaactggcggccgtgcgc
agtgacccgctggtgagcgacggcagcgcgcccgcgccgttcgtgctcgacgcgcacgac
cgcttctatctgtggcgcaaccacgccgacgaggtcgcggtagcgcagcaactgcgcgcg
cgccgcgaggcgggcagcagcgccatggccgcggacgagggcacggtggacgagctgttc
ggtggcgtgcgcagcaagtcggttgcgcgccagcgccaggcggtggcgcaggtcggcgga
cggcggctgttcgtgctcaccggcgggccgggcaccggcaagaccaccaccgtgctgcgc
atgctgctgatgctgcaacacctgggtccggaccgggtgccgaccatccaggtcggcgca
cccaccggcaaggcggcgcagcggctggtgcaatcgctgcggcaaggcaagcaggcgctg
caggcgtcgctgcccgacgcgtggcggccgcggctggagcgcatccccgacagcgaggcg
ctcaccctgcaccgcatgctcgcctacgatccgcgtcgcaaccggttcggccgcaatgcc
gcgcacccgctggcggccgacatcgtggtggtcgacgaggcctcgatgatcgacctggcg
ctgctgcgcgcgctgctcgaagcggtgcgtccggaggcgacgctggtactggtgggcgat
gccgaccagctcacctcggtggcggccggctcggtactgatggacgtggtggcggtgatg
gaagcggagggcgcgtccgacatcgtccgactggaacacagcttccgcgcgcagcagcag
ctggtggcggtcaatcgcgccgtgcgcgccggtgatgcggccgcgctgcgcgaggccgtg
gcgcacgcgggggagcatgcgcggtggatgcaggtcgacgacgcgacccaactgcgccac
gagctgctcggctggatcggggagctggggcgcctgccgatccgccccgtccttcctccc
cacctcgccgggctggaggaagtcggcgccgagcgcggcaccctcgcgctgcaggcgctg
cacgccctggcgcggcgccagctgctgtgcgcactgcgcgaggaaggcttcggcgcgctg
gcgctcaacgactggatcgagcagcgcctcaagcaggcctggggggtgccggaggatcgc
gcgtggtatccgggccgcgccgtgttgatcacgcgcaacgactacgccacgcggctgtac
aacggcgacgtcggcctctgcctggccgatgccggcggtgcactgcgggtgtggttcgag
accaccaccgccgatggccagccgagcgcgcgcagcttcgcccccggcacgctgccggcg
cacgagggggccttcgcgatcaccatccacaagagccagggctccgagtacgaggaggtg
gccgtgctgctgccgccggatccgcagagccggatcctgtcgcggcagttgctctacacc
gggctgtcgcgggcgcggaagaccgtgttgttgtggtcgtccggggccgcgctggatacg
tcgctgacgcgcccggtccgacgcgctggcgggttggccgatcggctcgcgtcccccggg
gaaccgcaacagctcacgcttctgtag
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