Frateuria soli: LQ771_04780
Help
Entry
LQ771_04780 CDS
T08854
Name
(GenBank) filamentous hemagglutinin N-terminal domain-containing protein
Organism
fsg
Frateuria soli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5649
TPS
PATR
SH3_7
Motif
Other DBs
NCBI-ProteinID:
UGB39164
LinkDB
All DBs
Position
1049005..1058268
Genome browser
AA seq
3087 aa
AA seq
DB search
MHTTRATSRKDSLASLRRKALPLSLSLLLCGALASGPARAAGGVARTTTPTGGTIVGGSG
SILQDGANVVINQASDKLVLNWQSFNLGEDALVRFNQPGSSAIALNRILDQNPSQIFGQI
SSNGQVFLINTHGIIFGSTAQVNVGGLVASTLDLTPTDFLSNHFNLDAVGGGAGVVNHGT
IAAASGGSVSLIGGSVANDGVILANYGRINLDGAEHAVLDFDGNGLINVQITGELKQRLD
ARAAVSNAGKLQADGGTVVLEAAAARDLFTHLVNNSGLIDAGAISHDGGVVRLVARGGDT
TNSGSIDVSGTRGGSAQLLSDRNVALTGDIDASGTQGGGRIRVGGGAQGGEGLLHASTST
VGAGARLNADATQSGKGGSIVVWSDHDTQVAGQFSARGGVQGGDGGFVETSAEHVRIDDA
AHVSTLAPQGRNGTWLIDPTDFTIGSGGDMTAAAVESALGSGNLTIQSTDGGTAGSGNIY
VEDVLGWSANTLTLTALNDIDIDAAVTTTGTAGLVLNASTAIGAAPAIAGGRVNLADTLT
LGGSGGLTVAGTVHSVSGTLDISGLSSGASIGGLDGNGLVNLGGNALTLSNADGGVFSGV
IKGAGGSLVMAGGTQTLSGSNNYGGGTTLGGGVLTVAGDANLGKSTGGLTFNGGTLATSA
AFTSARDIVMQGNGTVQAGAALTLSGTISGSGRLTKAGAGTLTLSGTNTYGGGTTISAGT
LKVSSDANLGATTGGVTFNGGTLNNTAAFTSARAITLQGAGTLQTGANLTLSGVISGGGG
LTKTGSSTLTLSGIETYTGATDIAAGTLVLSGAGSVASSSGVTADGTFDISGTTAGASIA
SLAGSGTVTLGSKTLTLSNASGSFGGVIGGTGGLTLAGGSQTLSGVNTYSGATSISAGTL
MLSGAGSVAGSSGVAANGTFDISGTTGATIASLGGSGTVTLGSKTLTLSNASGSFGGVIG
GTGGLTLAGGNQTLGGINTYTGNTTLEGGVLTVSSDANLGGAAGDLVFDGGTLAISSAFT
SARDIILQGNGTLQTGANLGLSGVISGSGDLAKTGSSKLTLSGINTYTGATDVTAGTLAL
SGAGSLADSSGVTADGTFDISGATAGATIASLDGAGTVSLGGKTLTLSNASGTFDGVIGG
SGGLTLAGGNETLTGANTYSGGTTISGGTLSISSNASLGATTGALTLDGGTLENTASLAL
DRTLALGTGGGTLQTGAGTNLTLSGAVSGTGGLAQTGTGSLTLGGDVTTGGSQSYGKVFL
GNDVTLASSTGSVDFAGTVDNADATARALSVIANNGSIGFGGAVGGGANGRLAGLTTSSQ
SFSAGALAVGGNLSVTTTSGGITQGGAFLVGGNAGFDAGSNLISLTNAGNDFGGTVDLTG
GATAIGDGNGLVLGTLATDSLTAISHGPLDLGSGSVTGNLKATSNDGAITQSGGLAVTGT
STLDAGANAITLNAAGNDFQGTVRLLNSGAYDVALDNGSHALSMGASTLGTGALSLAGNG
ITQSGSIVQAAGAGAVNLQAGGGALVLADSSNDFTGAVSAQGAGISLQTLGDLRVAALDA
GTDGSVSLVAGGTLDLAALGAIDTGNGDLTLGAGGSFTTSADLSGRNVSLRGDGGLILSN
NVAASGTLDLTSSNATITQIGGTLVAAGATTVDAGTGSIGLTAGTNDFQGDVTLTGGATT
INDANQLTLAAQDTGDLSVTSHGNLVLGEGTVNGVLTAGSSGGTISQASGGLTVTGTSSI
DAGGGAITLTDGNNDFGDTVGLNGGAIAITDRNALTLGGLATGALSVSSHGNLALGASTI
TGTLDLASNGGDITQAGALSVTGVSTIDADSGLITLGLLNDFQDTVDLTGGDSVITDTNA
LALGILDTGALTVTSTGSLGLGSGSIGGDLTATSQGGAITQTGALAVQGISVLDAGAGAI
TLGSAANHFTGAVSLTGAGIALRDAGNLTVAALANQPDTGISLIAGGSLVLPAGAIDTGT
ADLVLAANGGTLGTTGALSGANVSLSGRDGLALADAVTATNTLTLASAVGDITQTAGALT
AAHLTGSAGGTVLLGQVNAIGQLDGFSADGFTLLNNGNLTIAGPVAGGATGVDITSSSGL
LSVAGDVSGGSIALQGVGISQSGGSIDAGSGQVSLQSGAGIAQTGGSITAGTLSGSTVGD
ASLAGANQVANLGSFSAANLSLTNAGGMTLAGPVTVTGAAALTVGGALAINNTLSAAATT
LDVSGAITEGAGGNLATGTLSGQASGNVTLTRGNHVGTLGNFNATSFALANGQALTVNGN
LGVGAGSIALTNTAGALSVNSALGGGSIALDSAADLVLGKAINATTLSLKSAGSISQTAT
GLITAGTLSGQSAGTTTLNQANAISALGNFSANGFSLTSTSALAVDGTVDGGAGIALATG
GNLLVNGTLKGDATDLSAAGTIGEGASGNIAADMLTGQAGGAVTLNGPNHIGTLGNFQAA
GFSLRDAQDLGISGTVDGGAGTSIDTAGNLVVSGIVKGSSTRLNVAGALSESGSGHIVAD
TLAGHVTGSASLTGNNTVGSLGNLDAAGLSFTNTGALAIAGTVDGGASTALTTRAGGLTI
DGALAGTGTSLDIAGGIDQSSQGRITAGTLSGHAGGDVALDGDNRIDILGSFSARDFALS
NGKAMAVNGPLTASGGNIGLATTAGTLSVNTALSGDAISLASVADLALGQAIHGGLVTLT
SGGKISQTAGGLITADSLSGHSTGSTTLDQANSIGTLNGFGANGLTITTNRALTVTGTVD
GGGSTVLTTGGNLAINGSLSGDTTRLTVTGNISEGGAGSITAHTLAGQATGAVVLNGANR
LDTLGGFGAAGFTLSNGPSLTVTGALDGGASVDLTITRGDLLINGRISSKAATLVSSGAI
TEGQGGSIVADTLSGRAGGFTQLGTATSPLANYIGTLGGFSSTAGFSLTNAQTLTLASVG
GSAYTVDAGTASLYLGVTGGDLLQIGKTWLYDGKGAFSSTGRIGTSDAPIYVTGTGPQEV
ALVGMPPAYFYAVSASGNLLPLTGGSSVNVPTSLFTSRAQNANNHTDVYIDPSVISANYR
SFGIVPSGILLPADQQACDPEMEECDE
NT seq
9264 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccacccgcgccacttcccgcaaggactccctcgccagcctgcgccgcaaggcc
ttgccgctgagcctgtcgctgctgctgtgcggtgcgctcgccagcggaccggcccgggct
gctggcggcgtggcgcggaccaccacgccgaccggcggcaccatcgtcggcggcagcggc
agcatccttcaggatggcgccaacgtggtgatcaaccaggccagcgacaagctggtgctg
aactggcagagcttcaacctgggcgaggacgccctggtgcgcttcaaccagccgggcagc
tcggcgatcgcgctcaaccgcatcctcgaccagaacccgagccagatcttcggccagatc
agctccaacgggcaggtgttcctgatcaacacccacgggatcatcttcggcagcaccgcg
caggtgaacgtgggcgggctggtggccagcacgctggacctcacgcccaccgacttcctc
tcgaaccacttcaacctcgacgccgtcggcggcggcgcgggggtcgtcaaccacggcacg
atcgcggcggccagcggcggctcggtcagcctgatcggcggcagcgtggccaacgatggc
gtgatcctggccaactatggccggatcaacctcgacggcgccgaacatgccgtgctggat
ttcgacggcaacgggctgatcaacgtccagatcaccggcgaactcaagcagcgcctggat
gccagggccgcggtgagcaacgccggcaagctgcaggccgacggcggcaccgtggtgctc
gaagcggccgcggcgcgcgacttgttcacccacctggtcaacaactccggcctgatcgat
gccggcgcgatcagccatgacggcggcgtggtgcggctggtcgcccgcggcggcgacacg
acgaacagtggcagcatcgacgtcagcggcactcgcggcggcagcgcgcaactgctgtcc
gaccgcaacgtggccctgactggcgatatcgatgcctccggcacgcaaggtggcggccgc
atccgcgtcggcggtggcgcgcagggcggggaaggcctgctgcacgcctccaccagcacg
gtcggcgccggtgcccgcttgaacgccgacgccacgcagtcgggcaagggcggctcgatc
gtggtgtggagcgaccacgacacgcaggtcgccggccagttcagcgcccgcggcggcgtc
cagggcggcgatggcggcttcgtggaaacctccgccgaacacgtgcggatcgacgacgcc
gcgcacgtcagcacgctcgcgccgcagggccgcaacggcacgtggttgatcgacccgacg
gacttcaccatcggctcgggcggcgacatgaccgcggcggccgtagagagcgcgctcggc
agcggcaatctcaccatccagtcgaccgacggcggcactgccggctcgggcaacatctac
gtcgaggatgtcctcggctggagcgccaacacgctcacgctgaccgccctcaacgacatc
gacatcgacgccgcggtcaccacgaccggcaccgccggcctggtgctgaatgcttccacg
gcgatcggcgcggcaccggccatcgccggcggccgggtcaacctcgccgacaccctgacg
ctcggcggcagcggcgggcttaccgtggccggcaccgtgcacagcgtcagcggcacgctc
gacatctccggcctgagcagcggcgccagcatcggtggcctggatggcaacggactggtc
aacctgggcgggaacgcgctgacgttgagcaacgcggacgggggcgtgttcagcggcgtc
atcaagggcgccggcggcagcctggtcatggccggcggtacgcagacgctgagcggcagc
aacaactacggcggcggcaccacgctcggcggtggcgtgctgacggtggccggcgacgcc
aacctcggcaaatccaccggcgggctgaccttcaatggcggcacgctcgcgaccagcgcg
gctttcaccagcgcccgcgacatcgtcatgcagggcaacggcaccgtacaggccggcgcc
gcgcttaccctgtccggcaccatcagcggaagcgggcggctgaccaaggccggcgccggc
acgctcacgttgagcggcaccaacacctatggcggcggcaccacgatcagcgccggtacg
ctgaaggtgtccagcgacgccaacctgggcgccaccaccggcggagtgaccttcaacggc
ggcacgctcaacaacaccgccgcctttaccagcgcgcgcgcaatcacgttgcagggcgcc
ggtacgctgcagaccggagccaacctcaccttgtcgggcgtgatcagcggcggcggtggg
ctcaccaagaccggcagcagcacgttgacgctttcgggcatcgaaacctacaccggcgcc
accgacattgccgcgggcacgctggtcctgtcgggcgccggcagcgtggccagttccagc
ggcgtgacggccgacggtacgttcgatatctcgggcaccacggccggcgcgtccatcgcc
agcctggccggcagcggcacggtcaccctgggcagcaagacgctgacgctgagcaatgcc
tcgggcagcttcggcggcgtgatcggcggcaccggcgggctcaccctcgccggcggcagc
cagacgctttccggcgtcaacacctacagcggcgccaccagcatcagcgcaggcacgctg
atgctttccggtgccggcagcgtggccggttccagcggcgtggcggccaatggcacgttc
gacatctccggcacgaccggcgcgaccatcgccagcctgggcggcagcggcacggtcacg
ctgggcagcaagacgctgacgctgagcaacgcctcgggcagcttcggcggcgtgatcggc
ggcaccggcgggctcactttggccggcggcaatcagacgctcggcggcatcaacacctac
accggcaacaccacgctcgaaggtggcgtgttgacggtatcgagcgacgccaatctcggc
ggcgcggccggcgatctcgtcttcgacggcggcacgctcgccatctccagcgcattcacc
agcgcgcgcgacatcatcctgcaaggcaacggcacgctgcagaccggcgccaaccttggc
ttgtccggcgtgatcagcggcagcggcgacctcgccaagaccgggagcagcaagctgacg
ctctccggcatcaacacctacaccggcgccaccgacgtcactgccggcacgctggccttg
tccggcgccggcagcctggccgactccagcggcgtcacggccgacggcacgttcgacatc
tccggcgccaccgcaggcgcgaccatcgccagcctcgacggcgccggcaccgtcagcctg
ggcgggaaaacgctgacgctgagcaacgcctcgggcaccttcgacggcgtcatcggcggc
agcggcggcctcaccctggccggcgggaacgaaaccctgaccggcgcgaacacctacagt
ggcggcaccacgatcagcggcggcacgctctcgatttccagcaacgccagtctgggcgcg
accaccggcgcgttgaccctcgacggcggcacgctggaaaacaccgcctcgctggcgctg
gaccgcacgctggcgctgggcacgggcggcggcaccctgcagaccggcgcgggcaccaac
ctcaccctgtccggtgccgtcagcggcacgggtggcctggcacagaccggcaccggctcg
ctcaccctgggcggtgacgtcaccaccgggggcagccagagctacggcaaggtgttcctg
ggcaacgatgtcacgcttgccagcagcaccggttcggtggatttcgccggcaccgtggac
aacgccgacgcgaccgcgcgcgcgctgagcgtgatcgccaacaacggcagcatcggtttc
ggcggcgcggtgggcggcggtgcgaatggccgtctggcgggcctgaccaccagcagccag
agcttcagcgccggtgcgctggcggtgggcggcaacctgtcggtgaccaccaccagtggc
ggcatcacccagggcggggcgttcctggtcggcggcaacgccggcttcgacgcgggcagc
aacctcatttccctgaccaacgccggcaacgacttcggcggcaccgtcgacctgaccgga
ggcgccaccgccatcggcgacggcaacggcctggtgctcggcacgctcgccacggacagc
ctcaccgccatcagccacggtccgctcgacctgggcagcggcagcgtgaccgggaacctc
aaggccaccagcaatgacggtgcgatcacccagtccggcggtcttgccgtaaccggcacc
agcaccctcgacgcaggcgccaatgcgatcaccctgaatgccgcgggcaacgatttccag
ggcacggtgcgcctgctcaacagcggtgcgtacgacgtggcgctggacaacggcagccac
gcgctgtcgatgggcgcgtccacgctgggcaccggcgccttgtcgctggccggcaacggc
atcacccaatcgggcagcatcgtccaggccgcgggcgcgggtgcggtgaaccttcaggcc
ggcggcggtgcgctggtgctggccgacagcagcaacgacttcaccggcgcggtcagcgcg
cagggtgccggaatctcgctgcagacattgggcgacctgcgcgtggccgcgctggatgcc
ggcaccgacggctcggtgagcctggtcgccggcggtacgctggatctggccgcgctgggc
gcgatcgataccggcaacggcgacctgaccctgggtgccggcggcagcttcaccaccagc
gccgacctgagcggccgcaacgtgtcgctgcgtggcgacggcggcctgatcctcagcaac
aacgtcgccgccagcggcacgctggacctcaccagcagcaatgcgaccatcacgcagatc
ggcggcacgctcgtcgcggcgggcgccacgacggtcgacgccggtaccggcagcatcggg
ctgaccgcgggcaccaacgatttccagggcgacgtcacgctgactggtggcgccaccacc
atcaacgacgccaatcagctgaccctggccgcgcaggacaccggcgatctctccgtcacc
agccatggcaacctggtgctgggggagggcacggtcaacggcgtgctgaccgcgggcagc
agcggcggcaccatcagccaggccagcggcgggctgaccgtgaccggcaccagctctatc
gacgccggcggcggcgcaatcacgcttaccgacggcaacaacgatttcggcgataccgtc
ggtctgaacggcggcgccatcgccatcaccgacaggaacgcgttgaccctgggagggctc
gccaccggcgcgctgtccgtcagcagccacggcaacctggcgctgggcgccagcaccatc
accggcacgctcgatctggccagcaacggcggcgacatcacgcaggccggtgcgctaagc
gtcaccggtgtcagcacgatcgatgcggacagcggcctgatcacgctgggcctgctcaac
gacttccaggacacggtggacctgaccggtggcgacagcgtcatcaccgacaccaatgcg
ctggcgctgggtatcctggacaccggtgccctcaccgtgaccagcaccggcagcctgggc
ctgggcagtggcagcatcggtggcgacctgaccgccaccagccagggcggcgccatcacc
cagaccggcgcgctggccgtgcaaggcatcagcgtcctcgatgccggcgccggcgcgatc
acgctcggcagcgcggccaaccatttcaccggagccgtcagcctcaccggtgccggcatc
gctttgcgcgatgccggcaacctgaccgtggccgcgctcgccaaccagcccgacaccggc
atcagcctgatcgccggcggctcgctggtgctcccggccggcgccatcgacaccggcacc
gccgacctggtgctcgccgccaatggcggcacgctcggcacgaccggcgcgctcagcggc
gccaacgtctcgctgagcggacgcgatggccttgccctggccgatgccgtgaccgcgacg
aataccctgacgcttgccagcgccgtgggcgacatcacgcaaaccgccggcgcgctcacc
gccgcccacctgaccggcagtgccggcggcaccgtcctgctcggccaggtcaacgccatc
ggccagctcgacggcttcagcgccgacggcttcaccttgctcaacaacggcaacctgacc
atcgccgggccggtcgccggcggcgccaccggcgtggacatcaccagcagcagtggcctg
ctctccgtcgccggcgacgtcagcggcggcagcatcgccctgcagggcgtgggcatcagc
cagtccggcggcagcatcgacgcgggcagcgggcaggtcagcctgcagtccggcgcgggc
atcgcacagacgggcggctcgatcacggccggcacgctcagcggcagcaccgtgggcgac
gccagcctggccggcgccaaccaggtggccaacctgggcagcttcagtgcggccaacctg
tcgctcaccaacgccggtggcatgaccctggccggcccggtcacggtgaccggcgccgcc
gcgctgaccgtcggcggcgccctggccatcaacaatacgcttagcgctgccgccaccacg
ctcgacgtgagcggcgcgatcaccgaaggcgccggcggcaacctcgccaccggcacgctc
agcggccaggccagcggcaacgtcaccctgacccgcggcaaccatgtcggcacgctgggc
aacttcaacgccaccagcttcgcgctcgccaacggccaggcgctcacggtcaacggcaac
ctcggcgtcggcgcaggcagcatcgcgctgaccaacaccgccggcgcgctgagcgtgaac
tcggccctcggcggcggcagcatcgcgctggattcggccgccgacctcgtgctgggcaag
gcgatcaatgccaccacgctcagcctgaagtccgccggctcgatcagccagaccgccacg
ggtctgatcaccgccggcacgttgagcgggcagtccgccgggaccaccacgctgaaccag
gccaacgccatctcggcactgggcaacttcagtgccaatggcttcagtctcaccagcacc
agcgcactggcagtcgacggcacggtcgatggcggcgccggcatcgcgctcgctacgggc
gggaacctgctcgtcaacggcaccctgaagggggatgccactgatctctcggcggccggc
acgataggcgagggcgcgagcggcaacatcgcggccgacatgttgaccgggcaggccggc
ggcgccgtcacgctcaacgggcccaaccacatcggcacgctgggcaacttccaggctgcc
ggcttcagcctgcgcgatgcgcaggacctgggcatctccggtaccgtcgacggcggcgcg
ggcacgagcatcgacaccgccggcaacctggtggtcagcggcatcgtcaagggctccagc
acgcgcctgaacgtggccggggcgctcagcgaaagcggcagcggccatatcgtggccgat
acgctggccggacatgtcaccggcagcgccagcctcaccggcaacaacacggtaggcagc
ctgggcaacctcgatgcggccgggctcagtttcaccaacaccggggcgcttgccattgcc
ggcaccgtcgatggcggggccagcacggcgcttaccacccgggctggcggcctgaccatc
gacggcgcgctcgccggcaccggcacctcgctggacatcgcgggcggcatcgaccagtcc
agccaaggccgcatcaccgcgggtacgctgagcggccatgccggcggcgacgtcgcgctc
gatggcgacaaccggatcgacatcctgggcagtttcagcgcgcgcgatttcgccttgagc
aacggcaaggcgatggcggtgaacgggccgctgaccgccagcggcggcaacatcgggctc
gccaccacggcgggcacgctgtcggtcaacaccgcgttgagcggcgatgccatctcgctc
gcgtccgtcgccgacctcgcattgggccaggccatccatggcggcctggtgaccctcacg
tccggcgggaagatcagccagaccgccggcggcctcatcaccgccgacagcctgagcggc
cactcgaccggcagcaccacgctcgaccaggccaattcgatcggaacgctgaacggcttc
ggcgcgaacggactgacgatcaccaccaaccgggcgctcaccgtcaccggtacggtcgac
ggcggcggcagcaccgtgctgaccaccggtggcaacctggcgatcaacggctcgctcagc
ggagacaccacgaggctgaccgtcaccggcaacatcagcgaaggcggtgccggcagcatc
accgcgcacaccctggcgggccaggccacgggtgccgtcgtgctcaacggcgccaaccgc
ctcgacacgctgggcgggttcggcgctgccggcttcacgctgagcaacggcccgtcgctc
accgtgaccggcgcgctcgacggtggcgccagcgtggacctgaccatcacccgcggcgac
ctgctgatcaacggccggatcagcagcaaggcggccacgctggtgtcctccggtgcgatc
accgaggggcaggggggcagcatcgtggctgacacgctgtcgggccgggcgggtggtttc
acccagctcggcacggcaaccagcccgcttgccaactacatcggcaccctgggcggtttc
tcctcgacggcgggcttcagcctcaccaacgcgcagacgctgacgctggcatcggtcggc
ggcagcgcctacaccgtcgatgccggcaccgcatcgctgtacctgggcgtgaccggcggc
gacctgttgcagatcggcaagacctggctctatgacggcaagggcgcgttctcctcgacc
ggtcgaatcggcacctcggatgcgcccatctacgtcaccggcaccggtccgcaagaggtc
gcgctggtgggcatgccgccggcgtacttctatgccgtgagcgccagcggcaacctgctg
ccattgacgggcggcagcagcgtcaacgtgccgacctcgctgttcaccagccgcgcgcag
aacgccaacaaccatacggacgtctatatcgacccgagcgtgatctcggccaactaccgc
tcgttcggcatcgtgccctccggcatcctgctgcccgccgaccagcaggcctgcgatccg
gaaatggaggaatgcgatgagtaa
DBGET
integrated database retrieval system
