Frateuria soli: LQ771_05215
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Entry
LQ771_05215 CDS
T08854
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fsg
Frateuria soli
Brite
KEGG Orthology (KO) [BR:
fsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fsg03009
]
LQ771_05215 (rimO)
Enzymes [BR:
fsg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LQ771_05215 (rimO)
Ribosome biogenesis [BR:
fsg03009
]
Prokaryotic type
ribosomal protein modification factors
LQ771_05215 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
UGB39246
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All DBs
Position
1144881..1146218
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AA seq
445 aa
AA seq
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MSQVSPKIGFVSLGCPKALVDSERILTQLKVEGYEIVPSYQAADAVVVNTCGFIDAAVQE
SLDAIGEALHENGKVIVTGCLGKRSELIREAYPEVLSISGPQDYASVMSAVHTALPPQRN
PLLDLVPDTGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDQVLVEAERLVK
GGVKELLVISQDTSAYGVDLKYAEREWRGKAYRTRMTELCQGLSELGVWTRLHYVYPYPH
VDEVMPLMAKGKILPYLDIPFQHASPRILKLMKRPGNIDRTLERIRNWRAAVPDITLRST
FIVGFPGETDAEFEELLDFLREAELDRVGAFAYSPVEGARANELPDPVSEELKEDRLERF
MAVQAEISAAKLQRKLGRTLTVLVDEAGVDGAVARSAADAPEIDGVVHIADGQALKPGQF
VQVVVEGADEHDLHARLAQPLLKVV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggtttctcccaagatcggtttcgtcagcctcggctgccccaaggcgctggtt
gattccgagcgtatccttacccagctcaaggtggagggctacgagatcgtgcccagctac
caggcagcggacgcggtggtggtgaacacctgcggcttcatcgacgcggcggtgcaggag
tcgctggacgcgatcggcgaggcgctgcacgagaacggcaaggtgatcgtcaccggctgc
ctggggaagcgctcggagctgatccgcgaggcctatcccgaggtgctctcgatcagcggc
ccgcaggactacgccagcgtgatgagcgcggtgcacacggcgctgccgccgcagcgcaat
ccgctgctcgacctggtgcccgacaccggcatcaagctgacgcccaggcactacgcgtac
ctgaagatttccgagggctgcaatcaccgttgcagcttctgcatcatcccctcgatgcgc
ggcgacctggtgtcgcggccggtcgaccaggtgctggtcgaagccgagcggctggtcaag
ggcggcgtgaaggagctgctggtgatctcgcaggacaccagcgcctacggcgtggacctt
aagtacgccgagcgcgagtggcgcggcaaggcgtaccgcacgcgcatgaccgagctctgc
cagggcctgtccgagctcggcgtgtggacgcgcctgcactacgtctacccgtacccgcac
gtggacgaggtgatgccgctgatggcgaaggggaagatccttccctacctggacatcccg
ttccagcacgccagcccgcgcatcctcaagctgatgaagcggcccggcaacatcgacagg
acgctcgagcgcatccgcaactggcgcgccgcggtgccggacatcaccctgcgcagcacg
ttcatcgtcggcttccccggcgagactgacgccgagttcgaggaactgcttgacttcctg
cgcgaggccgagctcgatcgcgtgggggcatttgcctactcgccggtcgaaggcgcccgg
gcgaacgagttgcccgacccggtttccgaggaactgaaggaagaccgcctcgagcgcttc
atggcggtgcaggcggagatctccgcggccaagctgcagcgcaagctcggccgcacgctg
accgtgctggtcgacgaggccggcgtcgacggcgcggtcgcgcgctcggcggccgatgcg
ccggaaatcgatggcgtcgtccacatcgccgacgggcaggcgctcaagcccggccagttc
gtgcaggtggtggtcgagggggccgacgagcacgatctgcacgcgcggctggcgcagccg
ctgctcaaggtcgtgtag
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