Frateuria soli: LQ771_05850
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Entry
LQ771_05850 CDS
T08854
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
fsg
Frateuria soli
Brite
KEGG Orthology (KO) [BR:
fsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsg03032
]
LQ771_05850
03036 Chromosome and associated proteins [BR:
fsg03036
]
LQ771_05850
03400 DNA repair and recombination proteins [BR:
fsg03400
]
LQ771_05850
DNA replication proteins [BR:
fsg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LQ771_05850
Chromosome and associated proteins [BR:
fsg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LQ771_05850
DNA repair and recombination proteins [BR:
fsg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LQ771_05850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UGB39364
LinkDB
All DBs
Position
1276453..1276761
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AA seq
102 aa
AA seq
DB search
MTKSELIEALARRQTHLAFSDVELAVKSVIEQMSHALAQGERIEVRGFGSFALHYRPPRM
GRNPKTGDAVALPGKHVPHFKPGKELRERVNLSLQAEETEVA
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgaactgatcgaggcgctggccaggcgccagacccacctcgcgttcagc
gacgtggagctcgcggtcaagagcgtgatcgagcagatgagccacgccctggcacagggc
gagcgcatcgaggtccgcggcttcggcagcttcgcgcttcactatcggccgccgcgcatg
gggcgcaaccccaagaccggcgacgcggtggctctgccgggcaagcacgtgccgcacttc
aagccaggcaaggagttgcgcgagcgggtgaatctctcgctgcaggccgaggaaaccgaa
gtggcctga
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