Frateuria soli: LQ771_07560
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Entry
LQ771_07560 CDS
T08854
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fsg
Frateuria soli
Pathway
fsg03410
Base excision repair
fsg03430
Mismatch repair
fsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQ771_07560 (recJ)
03430 Mismatch repair
LQ771_07560 (recJ)
03440 Homologous recombination
LQ771_07560 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsg03400
]
LQ771_07560 (recJ)
DNA repair and recombination proteins [BR:
fsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LQ771_07560 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LQ771_07560 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LQ771_07560 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
UGB39677
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All DBs
Position
complement(1656825..1658651)
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AA seq
608 aa
AA seq
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MSTPTLRRREPAGAPAGWSEAVHPVLRQVYAARGVLHPGQAEHRLRHLLAPQSLGGLDRA
VALLIEAIAGDWSIVVAGDYDCDGATGTAVAVRGLRLLGARRVDYVIPNRFVHGYGLSPA
LVASLEPAPQLIVTVDNGVASIAGVAAAKARGIRVIVTDHHLPGERLPAADALVNPNVLE
VRACGHGEPACETCAGEARMNQGFPSRALAGVGVMFYLLLAVRAKLYPCDRPDREDGKAA
SHGRAPHKSDRPDLSSLLDLVALGTVADLVPLDFNNRVLVEAGIHRIRSGRACPGITALV
EAGRRSLAGVCASDLGYAVGPRLNAAGRLEDMRLGVECLLTDDPVQARGLAERLSAINQE
RRELQEAMVAEAEAMIGALGLEGMGERTGVSLYEPTWHAGVVGLVASKLKERLHRPVIAF
APADEDRPGELRGSARSIAGFHVRDALAAIDARLPGLIERFGGHAMAAGLSLKAADYPRF
AEAFDAIAREWLDEERLQAVLYTDGELPPGNFTLDLARQLRDGGPWGQGFPEPLFDNLFE
CAQWRLMGERHWRLSLRDPRDGAVHEAVMFNVRASAPPPRLRAVYELTINEWQGRESARL
LVRHVEPA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgccaaccctgcgccgccgggagccggccggtgctcccgcgggctggagcgag
gcagtccacccggtactgcgccaggtctatgcggcacgcggcgtgctgcatccggggcag
gccgaacaccgcttgcggcacctgcttgcgccgcagtcgctgggcgggctcgatcgcgcc
gtggcgctgttgatcgaggcgatcgcgggcgactggtcgatcgtcgtcgccggcgactac
gactgtgatggcgcgaccggcacagccgtggccgtgcgcgggctgcgcctgctcggcgcg
cggcgggtggattacgtgatccccaaccgcttcgtgcacggctacggcctgagccccgcg
ctggtcgcctcgctcgagcccgcgccgcagttgatcgtcaccgtcgacaacggcgtggcc
agcatcgcgggcgtcgcagcggccaaggcgcgcggcatccgcgtgatcgtcaccgaccac
cacctgccgggcgaacggttgccggccgccgacgcgctggtcaatcccaacgtgctcgaa
gtgcgcgcctgcgggcatggcgagccggcatgcgaaacctgcgccggcgaggcgcgcatg
aaccagggcttccccagccgcgcgctcgccggtgtcggcgtgatgttctacctgctgctc
gcggtccgggcgaaactctacccgtgcgatcgtcctgatcgcgaagacgggaaagcggcc
agccatggccgcgcgcctcacaagagcgaccggcccgatctttcctcgctgctggacctg
gtcgcgctgggcaccgtggccgacctggtgccgctggacttcaacaaccgcgtgctggtc
gaggcgggcatccaccgcatccgcagcggccgcgcctgcccgggcatcactgcgttggtg
gaggcgggcaggcgcagcctggccggtgtctgcgccagcgacctgggctacgccgtgggc
ccgcgcctcaacgccgcgggacggctggaggacatgcggctgggggtcgaatgcctgctg
accgacgatccggtgcaggcgcgtgggctggccgaacgactgagcgccatcaaccaggaa
cgacgcgagctgcaggaagcgatggtcgccgaggccgaggcgatgatcggcgcgctgggg
ctggagggcatgggcgagcgcaccggcgtgagcctttacgagccgacctggcatgcgggc
gtggtcgggctggtggcttccaagctgaaggagcggctgcaccgtccggtgatcgccttt
gcaccggccgacgaggatcggcccggggagctgcgcggctccgcacgctccatcgccggc
ttccacgtgcgcgacgccctggccgcgatcgatgcgcgcctgcccgggctgatcgagcgt
ttcggcggccatgccatggccgcgggcctgagcctgaaggccgccgattacccgcgcttc
gccgaggccttcgacgccatcgcgcgcgagtggctggacgaggaacgcctgcaagccgtg
ctctacaccgacggcgaactgccgccgggcaacttcacgctggacctcgcgcgccagttg
cgcgacggcggaccgtggggacagggttttcccgaaccgctgttcgacaacctgttcgag
tgcgcgcaatggcgcctgatgggcgagcggcactggcgcctgagcctgcgcgatccgcgc
gacggcgccgtgcacgaggcggtgatgttcaacgtgcgcgcttccgcgccgccgccgcga
ctgcgggcggtgtacgagctgacgatcaacgagtggcagggacgcgagagtgcacggctg
ctggtgcgtcacgtcgaaccggcctga
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