Frateuria soli: LQ771_08545
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Entry
LQ771_08545 CDS
T08854
Name
(GenBank) HAMP domain-containing protein
Organism
fsg
Frateuria soli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
ATG14
Motif
Other DBs
NCBI-ProteinID:
UGB36893
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All DBs
Position
1855223..1860571
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AA seq
1782 aa
AA seq
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MSAEICQETLDRTQLIAALRSLRSGDFSVRLPESGPGADVEVARLFNEVVGFNRQLTDEL
ERLSMVVGKEGRINQRGRVKAATGGWESAIRSVNDLIEDMVQPTAEVARVIGAVAKGDLS
QTMTVEIDGRPLRGEFLRIGKVVNTMVAQLASFASEVTRVAREVGTEGKLGGQATVKGVA
GTWKDLTDNVNAMATNLTGQVRNIAEVTTAVASGDLSKKITVEVKGEILELKNTINVMVD
QLNSFASEVTRVAREVGTEGKLGGQAQVPGVAGTWKDLTDNVNLMADNLTGQVRNIAEVT
TAVASGDLSKKITVEVKGEILELKNTINVMVDQLNSFASEVTRVAREVGTEGKLGGQAQV
PGVAGTWKDLTDNVNLMADNLTGQVRNIAEVTTAVARGDLSKKITVEVKGEILELKNTIN
VMVDQLNSFASEVTRVAREVGTEGKLGGQATVPGVAGTWADLTDNVNLMADNLTGQVRNI
AEVTVAVARGDLSKKITVDVKGEILTLKDTINVMVDQLNSFASEVTRVAREVGSEGKLGG
QAQVPGVAGTWKDLTDNVNLMAGNLTGQVRNIAEVTTAVARGDLSKKITVEVKGEILELK
NTINVMVDQLNSFASEVTRVAREVGTEGKLGGQAQVPGVGGTWKDLTDNVNAMAANLTGQ
VRNIAEVTTAVALGDLSKKITVDVKGEILELKNTINTMVDQLNSFASEVTRVAREVGTEG
KLGGQAQVRGVAGTWKDLTDNVNLMAENLTGQVRNIADVTTAVARGDLSKKITVDVKGEI
LALKDTINVMVDQLNSFASEVTRVAREVGTEGKLGGQAQVPGVGGTWKDLTDNVNLMATN
LTNQVRGIADVVTAVAQGNLKRKLSVDAKGEIAALADTINGMIETLATFADQVTNMAREV
GIEGKLGGQARVPGAAGLWRDLTDNVNQLAANLTNQVRSIADVATAVTKGDLSRSIAVAA
SGEMAALKDNINEMIRNLKDQTLKNAEQDWLKTNLARFSRMLQGVRDLATVSNLIMSELA
PLVNAQYGVFYVARREENETVLDLVASYGAESRDQLKPTFKLREGLVGQCAADKRAMLLT
DIPENFIRIGSGLGHAPPANVAILPALFEDDVKAVIELASFNRFNETHQNFLDQLMESVG
IVLNTIAATMRTEGLLKQSQLLTQELQARQTELTTKQEELHATNEELQEKAQLLENEKKQ
VEAKNFEIDMARRAVEEKAEQLALTSKYKSEFLANMSHELRTPLNSLLILSRLLADNPQG
NLSEKQTEFARTIHSAGSDLLSLINDILDLSKIESGTVSIEIGDMPMSGLKQHMERTFRQ
LASDKNLEFKVEFDPGLPASIRTDEKRLQQVVLNLLSNAFKFTGEGSVTLAVRPVSGGWS
SNHPVLRYAERAIEIAVTDTGIGIPKEKQKLIFEAFQQADGTTSRKYGGTGLGLSISREI
ARLIGGELQVRSTPGVGSTFTLFVPLEAVSPAALPVGGSSARYDNSGAMVPGALPAPMEV
TDDRDVLGDSPFVLIVEDDPTFASILLDIAREAGLKGVVSTAGAGTLALARKLQPHAITL
DLGLSDIDGFVLLDLLKHDPQTTHMPIQVISGADKRGAALSLGAFGVTEKPAAPEQLAEL
FDRLAGHIRQAPPPQPAPDTPNGMRPAPELGGARILIVDDDIRNIYSLTSVLESHGVEVL
HAEGGREGIAILEQTPGIDIALIDIMMPEMDGYETMQQVRAMPALAEVPLIAVTAKAMKG
DRQKCLDAGASDYIAKPVDIELLLALLRVWLARSRERSPVEL
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgaaatttgccaggaaacgctggatcgtacccagctcatcgccgctttgcgc
agcctgcgtagcggcgacttcagcgtgcgcctgcccgagagcggccccggcgcggatgtc
gaagtggcacgcctgttcaatgaggtggtgggcttcaaccggcagctcaccgacgaactg
gaacgcctgtcgatggtcgtgggcaaggagggccggatcaaccagcgcggtcgcgtgaag
gccgccaccggcggctgggaaagcgcgatccgctcggtcaacgacctgatcgaggacatg
gtccagcccaccgccgaggtggcgcgcgtgatcggcgcggtggccaagggcgacctctcc
cagacgatgacggtggagatcgacggtcgcccgctgcgcggcgagttcctgcgcatcggc
aaggtggtgaacacgatggtggcgcagctcgcctcgttcgcctccgaggtgactcgcgtg
gcccgcgaagtgggtaccgaaggcaagctcggtggccaggcgaccgtgaaaggcgtggcc
ggcacctggaaggacctgaccgacaacgtcaacgcgatggccaccaacctcaccggccag
gtgcgaaacatcgccgaggtgaccaccgcggtcgcctccggcgacctctccaagaagatc
accgtggaggtcaagggcgagatcctggagctcaagaacaccatcaacgtgatggtggac
cagctcaactccttcgcctcggaagtgacccgcgtggcgcgcgaagtggggaccgagggc
aagctcggcggccaggcgcaggtgccgggcgtcgccggcacctggaaggacctcaccgac
aacgtgaacctgatggccgacaacctcaccggccaggtgcgcaacatcgccgaggtgacc
accgcggtcgcctccggcgacctctccaagaagatcaccgtggaggtcaagggcgagatc
ctcgaactcaagaacaccatcaacgtgatggtggaccagttgaactcgttcgcctcggaa
gtgacccgcgtggcgcgcgaagtgggtaccgagggcaagctcggtggccaggcccaggtg
ccgggtgtcgccggtacctggaaggacctgaccgacaacgtgaacctgatggccgacaac
ctcaccggccaggtgcgaaacatcgccgaggtgaccaccgcggtggcgcgcggcgacctt
tccaagaagatcacggtggaggtcaagggcgagatcctggagctcaagaacaccatcaac
gtgatggtggaccagttgaactccttcgcctcggaagtgacccgcgtggcgcgcgaggtc
ggtaccgaaggcaagctcggcggccaggccaccgtgcccggtgtggccggcacctgggcc
gacctcaccgacaacgtgaacctgatggccgacaacctcaccggccaggtgcgaaacatc
gccgaggtgacggtggcggtggcgcgcggcgatctttccaagaagatcaccgtggacgtc
aagggcgaaatcctcaccctcaaggacaccatcaacgtgatggtggaccagctcaactcg
ttcgcctcggaagtgacccgcgtggcccgcgaggtgggctcggaaggcaagctgggcggc
caggcgcaggtgccgggcgtcgccggcacctggaaagacctcaccgacaacgtgaacctg
atggccggcaacctcaccggccaggtgcgaaacatcgccgaggtgaccaccgcggtggcg
cgcggcgacctttccaagaagatcacggtggaggtcaagggcgagatcctggagctgaag
aacaccatcaacgtgatggtggaccagctcaactcgttcgcctcggaagtgacccgcgtg
gcgcgcgaagtgggtaccgagggcaagctcggcggccaggcgcaggtgcccggcgtgggc
ggcacctggaaggacctcaccgacaacgtgaacgcgatggcggccaacctcaccggccag
gtgcgaaacatcgccgaggtgaccaccgcggtggcgctgggcgacctgtccaagaagatc
accgtggacgtcaagggcgagatcctggagctcaagaacaccatcaacacgatggtggac
cagttgaactccttcgcctcggaagtgacccgcgtggcgcgcgaagtgggtaccgagggc
aagctcggcggccaggcgcaggtgcgcggcgtcgccggcacctggaaggacctcaccgac
aacgtgaacctgatggccgagaacctcaccggccaggtgcgaaacatcgccgacgtgacc
accgccgtggcgcgcggcgacctgtccaagaagatcaccgtggacgtcaagggcgagatc
ctggcgctcaaggacaccatcaacgtgatggtggaccagctcaactccttcgcctcggag
gtgacccgcgtggcgcgcgaggtcggtaccgaaggcaagctcggcggccaggcgcaggtg
ccgggcgtgggcggtacctggaaggacctcaccgacaacgtcaacctgatggcgaccaac
ctgaccaaccaggtgcgcggcatcgccgacgtggtgaccgcggtggcgcagggcaacctc
aagcgcaagctgtcggtggatgccaagggcgagatcgcggcgctggccgacaccatcaac
ggcatgatcgagacgctcgccaccttcgccgaccaggtgaccaacatggcgcgcgaggtg
ggcatcgagggcaagctcggcggccaggcgcgcgtgcccggcgccgccggcctgtggcgc
gacctcaccgacaacgtgaaccagctcgcggcgaacctgaccaaccaggtgcgctcgatc
gccgacgtggcaaccgcggtgaccaagggcgacctctcgcgctcgatcgcggtggccgcc
tccggcgagatggccgcgctgaaggacaacatcaacgagatgatccgcaacctcaaggac
cagaccttgaagaacgcggaacaggactggctgaagaccaacctcgcccgcttctcgcgc
atgctgcagggcgtgcgcgacctggcgacggtgtcgaacctgatcatgtccgagctcgcg
ccgctggtgaacgcgcagtacggcgtgttctacgtcgcccggcgcgaggagaacgaaacg
gtgctggacctggtggcgagctacggcgccgagagccgcgaccagctcaagcccaccttc
aagctgcgcgaaggcctggtcggccagtgcgcggccgacaagcgggccatgctgctgacc
gacatcccggagaatttcatccgcatcggatcgggcctgggccacgcgccgccggccaac
gtggcgatcctgccggcgttgttcgaggacgacgtcaaggcggtgatcgagctggcctcg
ttcaaccgcttcaacgaaacccaccagaacttcctcgaccagctgatggaatcggtcggc
atcgtgctcaacacgatcgccgcgacgatgcgtaccgagggcctgctcaagcagtcgcag
ctgctcacccaggaactgcaggcacgccagaccgagctgactaccaagcaggaagagctg
cacgccaccaacgaggagctgcaggagaaggcccagctgctggaaaacgaaaagaagcag
gtggaggccaagaacttcgagatcgacatggcccgccgcgcggtggaggagaaggccgag
cagctggcactcacctccaagtacaagtcggagttcctggccaacatgagccacgagctg
cgcacgccgctcaattcgctgctgatcctctcgcgcctgctggcggacaacccgcagggc
aacctgagcgagaagcagaccgagttcgcccgcaccatccattcggccggctcggacctg
ctcagcctgatcaacgacatcctggacctctccaagatcgaatcgggcacggtctcgatc
gagatcggcgacatgccgatgagcgggctcaagcagcacatggagcgcacgttccggcag
ctggccagcgacaagaacctcgagttcaaggtggagttcgacccgggcctgcccgcatcc
atccgcaccgacgagaagcgcctgcagcaggtggtgctcaacctgctttccaacgccttc
aagttcaccggcgaaggcagcgtcacgctggcggtgcgtccggtgtccggcggctggagc
agcaaccacccggtgctgcgctatgccgagcgcgcgatcgagatcgccgtcaccgatacc
ggcatcggcattccgaaggagaagcagaagctcattttcgaggcgttccagcaggctgac
ggcaccaccagccgcaagtacggcggcaccggcctgggtctctcgatcagccgcgagatc
gcgcgcctgatcggtggcgagctgcaggtgcgttcgacgccgggcgtcggctcgactttc
acgctgttcgtcccgctcgaggcggtcagcccggccgcgctcccggtgggcggcagcagc
gcgcgctacgacaacagcggcgcgatggtgccgggcgccctgcccgcgccgatggaagtc
accgacgaccgcgacgtgctgggcgattcgccgttcgtgctcatcgtcgaggacgacccg
acgttcgcctcgatcctgctcgacatcgcccgcgaggccggcctcaagggcgtggtgtcc
accgcgggcgccggcaccctggcgctggcgcgcaagctccagccgcatgcgatcacgctg
gacctgggcctgtcggatatcgacggcttcgtgctgctggacctgctcaagcacgacccg
cagaccacgcacatgccgatccaggtgatttccggcgccgacaagcgcggcgcggcgctc
agcctaggagcgttcggggtgacggaaaagcctgccgctccggagcaactggccgagctg
ttcgaccgcctggccggccacatccgccaggcgcctccgccgcagccggcgcccgacacg
cccaacggcatgcgcccggcgcccgaactgggcggtgcgcgcatcctcatcgtcgacgac
gacatccgcaacatctattcgctgaccagcgtgctggaaagccacggcgtggaggtattg
catgccgagggtggccgggaaggcatcgcgatcctggaacagacgccaggcatcgacatc
gcgctgatcgacatcatgatgccggagatggacggctacgagacgatgcaacaggtccgc
gcgatgccggcactggccgaagtcccgctgatcgcggtcaccgccaaggcgatgaagggc
gaccgccagaaatgcctcgacgccggcgcctcggactacatcgccaagccggtcgacatc
gaactgttgctggcgctgctgcgcgtctggctggcccgctcgcgcgagcggtcgcccgtc
gagctgtag
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