Frateuria soli: LQ771_08640
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Entry
LQ771_08640 CDS
T08854
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fsg
Frateuria soli
Brite
KEGG Orthology (KO) [BR:
fsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsg03016
]
LQ771_08640 (truB)
Enzymes [BR:
fsg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LQ771_08640 (truB)
Transfer RNA biogenesis [BR:
fsg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LQ771_08640 (truB)
Prokaryotic type
LQ771_08640 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
DUF7311
DUF2642
Motif
Other DBs
NCBI-ProteinID:
UGB36912
LinkDB
All DBs
Position
complement(1883114..1884058)
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AA seq
314 aa
AA seq
DB search
MAKASRNLRGIRLGLRDLHGILLLDKPLGMSSNQALQAARRLLRAAKGGHTGALDPLATG
LLPLCFGEGTKIAGMLLGSRKAYLAECRLGITTTTADLEGEVVEQRAVPALDDAAIEQAL
ASLRGRIMQVPPAYSALKQGGEPLYVKARRGESVDVPPREVEIHRLELMAHEGDRLQLMV
ECGSGTYIRSLAVDLGERLGCGAHLTALRRLWVEPFREPAMVTLAELEQAAGQGEAAAEA
LLLPLAAGLADLPALALDEQQACAVTRGQQIPWPGSPEQGRSAAFDPDGRLLALVEPDPA
GRIRVLRGFNLPGP
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcgagtcgtaacctccgcggcatccgcctgggcctgcgcgacctgcacggc
atcctgctgctcgacaagccgctgggcatgagctcgaaccaggctctgcaggccgcacgg
cggttgctgcgcgccgccaagggcgggcacacgggagcgctcgatccgctggctaccggc
ctgctgccgctgtgtttcggcgagggcaccaagatcgccggcatgctgctgggctcgcgc
aaggcgtatctggcggagtgccggctggggatcaccaccaccacggcggacctggagggc
gaggtggtcgagcagcgggccgttccggcgctggacgacgctgccatcgagcaggcgctt
gcctcgttgcgcgggcgcatcatgcaggtcccgccggcgtattcggctctcaagcagggc
ggcgagccgctgtacgtgaaagcccgccgtggcgaatccgtggacgtaccgccgcgcgag
gtggaaatccaccgcctggagctgatggcgcacgaaggcgaccggctgcagctcatggtc
gaatgcggctccggcacctacatccgcagcctggcggtggaccttggcgagcggctcggt
tgcggggcgcacctgaccgcgttgcggcggttgtgggtcgagccgttccgcgagccggcc
atggttacgctcgcggaactggaacaggccgccgggcagggcgaggccgccgcggaggca
ttgctgctgccgctggcggccggcctggcggacctgccggcgctggcgcttgacgagcag
caggcgtgcgccgtaacccgggggcaacagatcccctggcctggcagcccggagcagggg
cgcagtgcggccttcgatccggatggtcgcctgctggcgctggtggagccggacccggcc
ggccgtatccgcgtcttgcgcgggttcaacctgcccggtccatga
DBGET
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