Frateuria soli: LQ771_08750
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Entry
LQ771_08750 CDS
T08854
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
fsg
Frateuria soli
Pathway
fsg03030
DNA replication
fsg03430
Mismatch repair
fsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQ771_08750 (holB)
03430 Mismatch repair
LQ771_08750 (holB)
03440 Homologous recombination
LQ771_08750 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsg03032
]
LQ771_08750 (holB)
03400 DNA repair and recombination proteins [BR:
fsg03400
]
LQ771_08750 (holB)
Enzymes [BR:
fsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQ771_08750 (holB)
DNA replication proteins [BR:
fsg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LQ771_08750 (holB)
DNA repair and recombination proteins [BR:
fsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LQ771_08750 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
AAA_5
AAA_19
NACHT
Motif
Other DBs
NCBI-ProteinID:
UGB36931
LinkDB
All DBs
Position
complement(1906667..1907602)
Genome browser
AA seq
311 aa
AA seq
DB search
MTAPPWHEAHWHRLQSRLARGALPHALLLCGPAGLGKRAFLQRFVRGLLCEHPREGEACG
RCRACLLLDAGTHPDSVTISYGLRKDGVQRKEIVVEQIRELSARLAMASQFGGWQVVVID
PADAMNTAAANALLKTLEEPSPQTLLLLVADAPWRLPQTIRSRCQRIEFQLPPPTEALAW
LGAQGVADPAAALEAAGGNPGLAQAWAAQGALARRQAVRKDLAALAAGRAEPMEVARRWL
DAEPEQCLWFAAQAAVDEARARASGSATPLGSQLDAEALADWYAFANRTRDALRGPLRGD
LLLLELLAGWR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaccgccctggcacgaggcgcactggcatcggctgcaatcacgcctggcgagg
ggggcattgccgcacgcgctgctgctgtgcggtccggcggggctgggcaagcgtgccttc
ctgcagcggttcgtgcgcggcctgctgtgcgagcacccgcgcgagggcgaggcctgcggc
cggtgccgcgcctgcctgttgctggatgccggcacccatccggattccgtcaccatcagc
tacggcctgcgcaaggacggcgtacagcgcaaggagatcgtggtcgagcagatccgcgag
ctctccgcgcggctggcgatggctagccagttcggtggctggcaggtggtggtcatcgat
ccggccgatgccatgaacacggccgcggccaatgcgctgctcaagacgctggaggagccc
tcgccgcagacgctgctgctgctggtcgccgacgcgccctggcggttgccgcagaccatc
cgcagccgctgccagcggatcgagttccagctgcccccaccgaccgaggcgctggcctgg
ctgggcgcgcagggcgttgccgatcccgcagccgccttggaggcggccgggggcaatccg
ggtctggcacaggcctgggcggcgcaaggtgcgctggcacgtcggcaggcggtgcgcaag
gacctggcggcgctggctgccggccgcgccgagccgatggaggtggcgcgccgctggctc
gatgccgagccggaacaatgcctgtggtttgccgcgcaggccgccgtggacgaggcacgg
gcccgtgcgtcgggcagtgccacgccgctcggcagccagctggatgccgaggcgctggcc
gactggtacgccttcgccaaccgaacgcgtgatgccttgcgcggcccgctgcgcggcgac
ctgctgctgctagagttgctcgccggctggcgctga
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