Frateuria soli: LQ771_11455
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Entry
LQ771_11455 CDS
T08854
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fsg
Frateuria soli
Pathway
fsg03030
DNA replication
fsg03430
Mismatch repair
fsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQ771_11455 (dnaE)
03430 Mismatch repair
LQ771_11455 (dnaE)
03440 Homologous recombination
LQ771_11455 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsg03032
]
LQ771_11455 (dnaE)
03400 DNA repair and recombination proteins [BR:
fsg03400
]
LQ771_11455 (dnaE)
Enzymes [BR:
fsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQ771_11455 (dnaE)
DNA replication proteins [BR:
fsg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LQ771_11455 (dnaE)
DNA repair and recombination proteins [BR:
fsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LQ771_11455 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
UGB37440
LinkDB
All DBs
Position
2478372..2481914
Genome browser
AA seq
1180 aa
AA seq
DB search
MMSAPFVHFHLHSEYSLVDSTIRIKALVDACVREGMPAVALTDDSNMFALVKFYKACSAA
GIKPIGGCDLWIGSPDDPRPWRLTLVCQDREGYLNLSRLVSRAWRDGQHGGRALVEANWL
TPQSTAGLIALLGRESEVGRVAMSQGVDAGSARLQPLARLFPDRLYLELTRCGREGEEAW
NTAALALGEVLDLPLIASNDVRFLKQDDFEAHEARVCINQGRVLADPKRPRDYSDQQYLK
SPRQMAELFADLPEALENTVELARRCNLELKFGTYYLPDFPVPEGYDLDSYIRDTARAGL
KERLATNPLAPGHTLADYETRLERELDVIIEMGFPGYFLIVADFINWGKQNGIPVGPGRG
SGAGSLVAWVLKITDLDPLQFDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYG
REHVSQIITYGSMAAKAVLRDSGRVLGMGYNAVDKIAKLIPPRPLDLTLSDALGRSEKSK
KEPDRVVRDFCELYEQDEEAHTLVDLALKLENLTRNVGKHAGGVVIGPKPLTEFAPMYCE
PGGGGMVTQYDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINARRAQAGEVPLDIGALPL
DDAPTYELLKRAQTVAVFQLESSGMQRMLKDARPDRFGDIVALVALYRPGPMDLIPSFVA
RKHGREDVEYPDPRVEPILKETYGIMVYQEQVMQMAQIVGGYTLGGADLLRRAMGKKKVE
EMVKHRATFREGAARDGLPGDKADAIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKAHY
PAEFMAATISSDMDNTDKAVTFLDESRAIGLTILPPDVNASDFMFVAVEPRVIRYGLGAI
KGVGQGACESIVEERLRGGPYKDLGDFCRRVDSSKLNRRVLEALILSGSLDALAPNRASL
MLQLPDAIKAAEQHLRDKQSGQNDMFGALMGSSTPAVQIELPTAPEWPLEQKLQGERDTL
GHYLSGHPTDPWREELAQLSTCPLGEIGERYQPPRPRKNDGEENRFRRGPDTPWTVAGMV
TAVRKRGDSDAFVRLEDGTGIIEVSFFGELYQQVAPLLTRDEMLVVDGGLRIDEFSGGGF
QLRARGAMTLADACRRHARALRVKLNGIGPGFEQELKQTLAGYRGGRATVILHGYHNRHA
QADLELGEQWRVEAIPDLLRALRALSWVEAARLRIVKSDA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
ttgatgtccgctcccttcgtccacttccacctgcacagcgagtactcgctggtcgactcg
accatccgcatcaaggcgctggtcgatgcctgcgtgcgcgagggtatgccggcggtggcg
ctcaccgacgacagcaacatgttcgcgctggtgaagttctacaaggcgtgcagcgctgcg
ggcatcaagccgatcggcggctgcgacctgtggatcggctcgccggacgatccgcgcccg
tggcggctgaccctggtctgccaggatcgcgagggctacctcaacctgtcgcgcctggtg
tcgcgcgcctggcgcgacggccagcacggcggcagggcgctggtcgaggcgaactggctg
actccgcagagcacggcgggactgatcgcgctgcttggacgcgagagcgaagtcggccgc
gtcgcgatgagccagggcgtggacgccggctcggcgcggctgcagccgctggcgcggctc
ttccccgaccgcctctaccttgagctgacccgttgcggccgcgagggcgaggaggcctgg
aataccgccgcgctggcgctgggtgaggtgctggacctgccgctcatcgccagcaacgac
gtgcggttcctcaagcaggacgacttcgaggcgcatgaggcgcgtgtctgcatcaaccag
gggcgcgtgctggccgatcccaagcgcccgcgcgactactccgaccagcagtacctgaag
tcgccccggcagatggcggagctgttcgccgacctgcccgaggcgctggagaacacggtc
gagctggccaggcgctgcaatctggagctgaagttcggcacctattacctgcccgacttc
ccggtacccgagggctatgacctcgacagctacatccgcgacaccgcccgcgcgggcctg
aaagagcgcctggccaccaacccgctggcacccggccatacgctggccgactacgagacc
cggctggagcgcgagctcgacgtcatcatcgagatgggctttcccggctacttcctgatc
gtggccgacttcatcaactggggtaagcagaacggcattccggtcggcccgggccgtggt
tcgggcgcgggttcgctggtcgcgtgggtgctcaagatcaccgacctggacccgctgcag
ttcgacctgctgttcgagcgcttcctcaaccccgaacgcgtgtcgatgccggacttcgac
atcgacttctgcatggaccggcgcgacgaggtcatcgattacgtcgcgcgcaagtacggc
cgcgagcacgtcagccagatcatcacctacggctcgatggcggccaaggcggtgctgcgc
gattccggccgcgtgctcggcatgggttacaacgcggtcgacaagattgccaagctgatc
ccgccgcgcccgctcgacctcacgctctccgacgcgctcggccgctcggagaaatcgaag
aaggagcccgaccgcgtcgtcagggacttctgcgagctgtacgagcaggacgaggaagcg
cacacgctggtcgacctggcgctcaagctggagaacctcacccgcaacgtcggcaagcac
gccggtggcgtggtgatcgggcccaagccgctgaccgagttcgcgccgatgtactgcgag
ccgggcggcggcggcatggtcacccagtacgacaaggacgacgtcgaagcggtcggcctg
gtgaagttcgacttcctgggcctgcgcacgctcaccatcatcgactgggcggtgaaggcg
atcaacgcgcgccgcgcacaagccggcgaagtgccgctggacatcggcgcgctgccgctg
gacgacgcgccgacctacgagctgctcaagcgcgcgcagacggtggcggtgttccagctc
gaatcctccggcatgcagcgcatgctcaaagatgccaggcccgaccgcttcggcgacatc
gtcgcgctggtggcgctgtaccggcccggcccgatggacctcattcccagcttcgtggcg
cgcaagcacggccgcgaagacgtggagtaccccgacccgcgcgtcgagccgatcctgaaa
gagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcagatcgtcggc
ggctacacgctcggcggcgccgacctgctgcgccgcgcgatgggcaagaagaaagtcgag
gagatggtcaagcaccgcgcgaccttccgcgagggtgcggccagggacgggctcccgggc
gacaaggccgacgccatcttcgacctgatggagaagttcgccggctacggcttcaacaag
tcgcacgcggccgcctacgcgctggtgtcctaccagaccgcgtggctcaaggcgcactac
ccggccgagttcatggccgcgacgatctcctcggacatggacaacaccgacaaggcggtg
acgttcctggacgagtcgcgcgcgatcggcctgaccatcctgccgccggacgtgaacgcc
tcggacttcatgttcgtggcggtggagcccagggtcatccgctacggcctcggtgcgatc
aagggcgtcggccagggtgcctgcgagtcgatcgtcgaggagcggttgcgtggcggcccc
tacaaggacctcggcgacttctgccgtcgggtcgactcgagcaagctcaaccgtcgcgtg
ctcgaagcgctgatcctgtccggcagcctggatgccctggccccgaaccgcgccagcctg
atgctgcagttgcccgacgcgatcaaggccgccgagcagcacctgcgcgacaagcagtcc
ggccagaacgacatgttcggcgcgctgatgggcagcagcacgccagcggtgcagatcgag
ttgccgaccgcgcccgagtggccgctggagcagaaactgcagggcgagcgcgacacgctc
ggtcactacctttccggccaccccaccgacccgtggcgcgaggaactggcgcagctctcc
acctgcccgctgggcgagatcggcgagcgctaccagccgccgcgtccgcgcaagaacgac
ggcgaggagaaccgcttccggcgcggcccggacacgccctggacggtggccggcatggtc
accgccgtgcgcaagcgtggcgacagcgatgcctttgtccggctggaagacggcaccggc
atcatcgaggtgagcttcttcggcgagctctaccagcaggtcgcgccgctgctcacccgc
gacgaaatgctcgtcgtcgacggcggcctgcgtatcgatgaattctcgggcggcggcttc
cagctgcgggcccgtggcgccatgacgctggccgacgcctgccgccgccacgcgcgagcg
ctccgggtcaagctcaacggcatcggccccggcttcgaacaggagctcaagcagacgctc
gccggctaccgcggcggccgcgccacggtgatcctgcacggctaccacaaccgtcacgcc
caggccgacctggagctgggcgagcaatggcgtgtggaagccatccccgacctgctgcgc
gcgctgcgtgcgctgtcgtgggtggaagcggccaggctccggatcgtcaagtccgacgcc
tga
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