Frateuria soli: LQ771_13180
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Entry
LQ771_13180 CDS
T08854
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fsg
Frateuria soli
Pathway
fsg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fsg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQ771_13180 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsg03019
]
LQ771_13180 (groL)
03110 Chaperones and folding catalysts [BR:
fsg03110
]
LQ771_13180 (groL)
03029 Mitochondrial biogenesis [BR:
fsg03029
]
LQ771_13180 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fsg04147
]
LQ771_13180 (groL)
Enzymes [BR:
fsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LQ771_13180 (groL)
Messenger RNA biogenesis [BR:
fsg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LQ771_13180 (groL)
Chaperones and folding catalysts [BR:
fsg03110
]
Heat shock proteins
HSP60 / Chaperonin
LQ771_13180 (groL)
Mitochondrial biogenesis [BR:
fsg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LQ771_13180 (groL)
Exosome [BR:
fsg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LQ771_13180 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LQ771_13180 (groL)
Exosomal proteins of breast cancer cells
LQ771_13180 (groL)
Exosomal proteins of colorectal cancer cells
LQ771_13180 (groL)
Exosomal proteins of bladder cancer cells
LQ771_13180 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UGB37760
LinkDB
All DBs
Position
complement(2859561..2861204)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVRFGEDARSRILKGVNTLANAVKVTLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELSDKYENLGAQIVKEAASKTSDVAGDGTTTATVLAQAFIQEGLKAVAAGMNPMDLKRGI
DKAVTAAVGELKKLSNPTADDKAIAQVGTISANSDANIGDIIATAMKKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINNQQSQQVELDDPFILIHDKKISNVRELLPILEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVAAVKAPGFGDRRKAILEDIAILTNGQV
ISEEVGLQLEKATINDLGRAKRVVITKENTTIIDGAGEAERIQSRISQIKAQIEETSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALKAVEGLKGDNEDQNLGIAITRRALEAPLRAIVANAGEEPSVILNKVKDGQGNFGYNA
ATGEFGDMVQMGILDPTKVTRTALQHASSVAGLAITTEAIVAELPKKEEHSHGGAPGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagaagtccgcttcggcgaagacgcccgctcgcgcatcctcaagggtgtg
aacaccctggccaacgcggtcaaggtcaccctcggcccgaagggccgcaacgtcgtgctc
gagaagagcttcggcgctccgacgatcaccaaggacggcgtgtccgtcgcgaaggagatc
gagctctcggacaagtacgagaacctcggcgcgcagatcgtcaaggaagccgcctccaag
acctctgacgtcgccggtgacggcaccaccaccgccaccgtgctggcgcaggcgttcatc
caggaaggcctcaaggcggtcgccgccggcatgaacccgatggatctgaagcgcggcatc
gacaaggccgtgaccgcggccgtgggcgagctcaagaagctctccaacccgaccgccgac
gacaaggccatcgcccaggtcggcaccatctcggccaactccgacgccaacatcggcgac
atcatcgccaccgcgatgaagaaggtcggcaaggaaggcgtgatcacggtcgaggaaggc
tcgggcctggagaacgaactcgacgtcgtcgagggcatgcagttcgaccgtggctacctg
tcgccgtacttcatcaacaaccagcagagccagcaggtcgagctggacgacccgttcatc
ctgatccacgacaagaagatctccaacgtccgcgagctgctgccgatcctcgaaggcgtc
gccaaggccggcaagccgctgctgatcgtggccgaggaagtcgagggcgaggcgctggcc
acgctggtggtcaacaccatccgcggcatcgtcaaggtcgccgccgtcaaggcgccgggc
ttcggtgaccgccgcaaggccatcctcgaggacatcgcgatcctgaccaatggccaggtg
atctccgaggaagtgggcctgcagctggagaaggccaccatcaacgacctgggccgcgcc
aagcgcgtggtgatcaccaaggagaacaccaccatcatcgacggcgccggcgaagccgag
cggatccagtcgcgcatcagccagatcaaggcgcagatcgaggagacctcctccgactac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggcggcgtggccgtcatcaag
gtcggtgccgccaccgaggtcgagatgaaggagaagaaggcccgcgtcgaagacgccctg
cacgccacccgtgcggccgtcgaggagggcgtggtgccgggcggcggcgtcgccctgatc
cgtgcgctgaaggccgtcgaaggcctcaagggcgacaacgaggaccagaacctcggcatc
gcgatcacccgccgcgcgctcgaagcgccgctgcgcgcgatcgtcgccaatgccggcgag
gagccctcggtcatcctcaacaaggtcaaggacggccagggcaacttcggctacaacgcg
gccaccggcgagttcggcgacatggtgcagatgggcatcctggacccgaccaaggtgacc
cgcaccgcgctgcagcacgcctcctcggtcgccggcctggcgatcaccaccgaggcgatc
gtggccgagcttccgaagaaggaagagcacagccacggcggtgccccgggtggcatgggc
ggcatgggcggcatggacttctaa
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