Candidatus Fervidibacter sacchari: Q2T83_02270
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Entry
Q2T83_02270 CDS
T09227
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
fsh
Candidatus Fervidibacter sacchari
Brite
KEGG Orthology (KO) [BR:
fsh00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Q2T83_02270
Enzymes [BR:
fsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Q2T83_02270
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
WKU16660
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Position
complement(520647..522581)
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AA seq
644 aa
AA seq
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MKGKFLVGLWCGICGIVVAFASFTEPAPPLRRMEKLGRGLVAIPLGDGQVYISWRILGTD
PEDIAFNLYRVVEGSAPARVNKRPIADTTDFVDKDVDLTRPVFYFVRPIVKGKEGPPSKP
FRLPANPPIRQYIAIPLKPLPDPKENLSVHRVGIGDLDGDGEYDFVVIRPAGGKDPAQVR
PSPTTFKVEAYLRDGTFLWRMDLGWNIEHGVHYFPLVVYDLDGDGKAEVICKTAEGTIFG
DGTMIGDTDGDGRTDYRNERGTVLEGPEFLSVIDGLTGKELARAPWIPRGRISDWGDNYG
NRVNRNLLAVAYLDGIRPSIIVFRGYYALTKVEAWDYRDGKLIKRWSWSNEKLPKEWWGQ
GYHNVRIGDVDSDGRDEILHGCMLIDDDGREVYTTSLGHGDRFHLTDIDPDRPGLEVFAC
HESPVACRGMGVELHCARTGKILWGPPEPTTGDVGRAMTADIDPRFTGMECWGAGGGARW
LFSCKGQVISTAPQMPYCNFGIWWDGDLLRELMDIHRGRGVVVIDKWDYENAKVVNLFTA
PAQGAYNAPLAYGDILGDWREEVITYADGELRIYTTTIPAQQRLYTFMHDPIYRIDVALQ
TMGYMQAHHPSFFVGVGMKRPPRPRIFTGETETAKAFILIDRPK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaaagtttctcgtcggactttggtgcggaatttgcggaatcgttgtagccttc
gcttcgttcacggaacccgctccgcccttgcgccgcatggaaaagttagggcgcgggttg
gtagcgattccgttaggcgatgggcaagtttacatcagttggcggatactgggaactgac
ccagaagacatcgccttcaacctttaccgtgtcgttgaaggaagtgcacctgcgagagtc
aacaaacgcccgattgcggacacaacagactttgtggacaaagatgttgacttgacccgt
cctgtcttctatttcgtcagaccgattgtcaagggcaaggaaggtccacccagcaagcct
tttcgtttgccagcgaatccgccaatccgacaatacatcgctatccccttaaaaccactg
ccagacccgaaggaaaatctgtccgtgcaccgtgtcggaatcggtgaccttgacggagac
ggtgaatacgatttcgtcgtcatcagaccagcaggcggcaaagacccagcacaagtccgt
ccaagcccgacaacctttaaagttgaagcctacctgcgtgacggcactttcctttggcga
atggacttgggttggaacattgagcacggggttcattacttcccacttgtggtctatgac
cttgatggcgacgggaaagcggaggtaatttgcaagacagccgaagggacgattttcggt
gatggaacgatgattggcgatactgacggcgacgggcgaaccgattacagaaacgagagg
gggacagtgcttgaaggtcctgagttcctttcggtcattgacggtttgacgggaaaggaa
ttggcacgagcaccttggattccgcgtgggcgcatctccgattggggcgacaattacggc
aaccgagttaaccgcaacctgctggcagttgcttaccttgacggaatccgaccgagcatc
atcgtctttcgcggctactatgccttgacgaaagttgaggcgtgggattatcgggacgga
aaactcatcaaacggtggagttggagcaacgagaagttgccaaaagagtggtggggacaa
ggttaccacaatgtcaggatcggcgatgttgacagcgatggtagggacgaaattttgcac
ggttgcatgctgattgacgacgatgggcgggaagtttacaccacaagtttagggcacggc
gaccgattccacctgactgacattgaccctgaccgaccaggtctggaagttttcgcttgc
cacgaaagtcctgtcgcctgccgcggcatgggagtggagttgcattgcgctcggacagga
aaaatcttgtggggaccaccagaacccacgacgggcgatgtgggtagggcaatgactgcg
gacattgacccgagatttacgggcatggaatgttggggagcaggtggtggggcaaggtgg
ctgttttcgtgcaaaggtcaagtgatctcaacagcaccccaaatgccctactgcaatttt
ggcatttggtgggatggtgacttgctaagggaactgatggacattcacagagggcgcggt
gttgtcgtgattgacaagtgggactacgagaacgcaaaggttgtcaaccttttcacagca
cccgctcagggcgcttacaatgccccgctcgcttacggtgacatcttgggtgattggcga
gaagaagtcataacatacgccgacggcgaacttcggatttacacgactaccatcccggct
cagcaacggctttacactttcatgcacgacccgatttaccgaattgatgttgcgttgcaa
actatgggctacatgcaggctcatcatccgagtttctttgtgggcgttgggatgaaacga
ccgccacgaccgagaattttcactggcgagaccgagaccgcaaaggcattcatcctgatt
gacagaccgaagtaa
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