Candidatus Fervidibacter sacchari: Q2T83_06590
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Entry
Q2T83_06590 CDS
T09227
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fsh
Candidatus Fervidibacter sacchari
Pathway
fsh03030
DNA replication
fsh03430
Mismatch repair
fsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q2T83_06590
03430 Mismatch repair
Q2T83_06590
03440 Homologous recombination
Q2T83_06590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsh03032
]
Q2T83_06590
03400 DNA repair and recombination proteins [BR:
fsh03400
]
Q2T83_06590
Enzymes [BR:
fsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q2T83_06590
DNA replication proteins [BR:
fsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q2T83_06590
DNA repair and recombination proteins [BR:
fsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q2T83_06590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WKU17484
LinkDB
All DBs
Position
complement(1444476..1448090)
Genome browser
AA seq
1204 aa
AA seq
DB search
MVAKFVHLHVHSEYSLLDGAGRIKSLVKRACELEMPAIALTDHGVMYGIVEFYETCTEAG
IKPILGAEIYYTTKSRFDRGSRQHAEAHHLLLLCENEIGYRNLIKIVSKAHLEGFYYKPR
ADKELLAEYHEGLIATSACLASPICRAILRDDIAAAERMACEFREIFGPDNFFLELQDHG
IPEQKKVNEALIAMSKKLGIPLIVTNDVHYVRAEDWQAQDVLLAINTGAKSVEDEDRFRF
KSHEFYLKSAEEMAALFPDNLDALARTVEIAERCNCQLQLGEPKMPHYEVPGGLTPEEFL
RKLCYERLPLRYPEPSEEVKRRLEYELQVICQKGYAGYFLIVWDIVHYARSQGILVGPGR
GSAAGCLVSYVLGITNIDPLKYGLMFERFLNPERQSSPDIDLDFPDNRRDEIIAYVRRKY
GEDHVAQIVTFGTLQARAAVRDSGRVLKIDPALVDRVAKLIPMKMSLEEALEFSLELRQL
YETDEQIRRWLDTAKAIEGLARHASTHPCGVVIGSQPLIELVPLQRGHDGGVITQYDGPS
AEKVGLVKMDFLGLRNSTIIGRTVELVKETEGIEIDLNNLPLDDPKTYAMLSEGHTVGVF
QMEKTGWRKLLRELKPDKFEHLVPLVALYRPGPMEDIPKFIDGRHGKPIEYLHPRLEPIL
KETFGVMLYQEQVMRIAHELAGFTMPQAEILMRAMAKKKADLMEQMKPLFIEGCVKNGIS
EEDAQRIFERMEAFANYAFNKSHSAAYALVAYQTAYLKANYPVQYMAAFLSANRSFREKV
IVGIEECRRMKIPVLPPDINLSSYDFTIEEINGQRAIRFGLGAIKNVGDNAVEAIIQVRK
EGGPFTDIADFLRRVRPHRSVTRAVVESLIKVGAFDSLHPNRNQLLQALEMLWEQAGKSA
QPAAGQATLFGSDATVKSTSALLLPDVPDVSIKEKLEWERELLGVFLSANPLQAGYKVVA
NRITHSLDELTEVTSGALVRIWGMVVHLRPTVDRQNRPLLFAKLQDHSGAEVELVLSGDN
YHAFAHLFEKDALIYVEGIVRHEEPYRPNGSEEEEGEEEPQLIVRISPRYVERFTLEGVS
AASKPVNGTNDWVSPTPAQPKPSRLKPSTPAVDSKAIAHHHFTEGTQTAGSKLQLTLPPK
LKEDEAQRLKDLLTRNPGEVTVEVLIRNGSEVKRKQLPVKVKLSREFYEQLTNLLGKDAV
QIIR
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgaagtttgtgcatttgcatgttcactccgaatacagcctcttggatggagcg
ggtcgaatcaagagtttggtcaaacgagcctgtgaacttgaaatgccagcgatagccctc
accgatcacggtgtcatgtatggcatcgttgaattttacgagacatgcactgaggctggg
ataaagcctatcctcggcgccgaaatctactacacgaccaaaagcaggtttgaccgaggt
tcaaggcaacacgctgaggctcaccacttgttgctcctgtgcgaaaacgaaatcggctac
cgaaacctaatcaagatcgtgagtaaggctcaccttgaaggcttttactacaagccgaga
gccgataaggaactacttgccgaatatcacgaggggcttatcgccacgagtgcctgctta
gccagtcctatttgccgtgcaattttgcgggatgacatagcagccgctgaaaggatggca
tgtgagttccgcgaaattttcggtccagacaactttttccttgaactgcaagatcacggc
atcccggagcagaaaaaggttaacgaggctttgattgccatgagcaaaaaactcggcata
ccccttatcgtcaccaacgatgtccactatgtccgcgctgaggactggcaggctcaagat
gtcttgctggcaataaacactggtgcaaagtccgttgaagacgaagaccgcttcaggttc
aaaagccacgagttttacttgaaatccgctgaggaaatggctgcacttttccccgataac
cttgacgctctggctcggaccgttgaaatcgctgagaggtgtaactgtcaacttcaattg
ggcgaaccaaagatgcctcactacgaggttcctggcggtttgactccggaggagtttttg
cgcaagttgtgctacgaacggttgccattgcgatacccagagccctcagaagaagttaag
cgacgacttgagtatgagttgcaagtcatttgccagaaaggttacgccggctacttcctc
atcgtctgggacatagtccactatgcgaggtctcaaggcatcctcgttggtcctgggcgc
ggtagcgctgcgggttgcttggtcagttatgttttgggcataacgaacattgacccgctc
aagtatgggctcatgtttgaaaggttcctcaaccccgaaaggcaaagttcacccgacatt
gaccttgactttcctgacaacaggcgcgacgaaattatcgcctatgttcggcgcaagtat
ggtgaagaccatgtcgcccaaattgtcaccttcgggacacttcaagcgagggctgccgtc
agggacagtggtcgcgttctaaagattgacccagcgcttgttgaccgtgtcgccaaactc
atcccgatgaagatgagccttgaagaggctttggagttttctttagagttgcggcaactt
tacgaaacagacgaacaaattcgccgctggcttgacacggcgaaggcaatagaggggctt
gcccgccacgcttcaactcatccttgtggtgttgtcatcggtagtcaaccgctcatagaa
ctcgtcccattgcaacggggtcacgatgggggcgtcatcacccaatacgatggtccgtca
gcagaaaaggttggcttggtgaagatggattttctcggtttgcgcaactcaaccatcatc
ggtcgcaccgttgaactcgtgaaagaaaccgagggcattgagattgacctcaacaacttg
ccattggatgaccccaaaacctatgccatgctcagcgagggtcacactgtcggagtgttc
cagatggagaaaactgggtggcggaaattgctcagggaactaaagccagacaagtttgag
cacctcgtcccactcgtcgcactttacagacctggtccaatggaagacatcccgaagttc
attgatggcaggcacggtaagccgatagaatacttgcaccctcgcttggagccgattttg
aaggaaaccttcggtgtcatgctctatcaggagcaagtcatgaggatcgcccacgaactt
gctgggttcaccatgccgcaagcggagatattgatgcgggcgatggcaaagaagaaagcg
gatttgatggagcagatgaaaccgttgttcattgaagggtgcgtcaaaaacgggatatcc
gaggaagacgcccagcggatttttgaacggatggaagccttcgccaattacgcgttcaac
aaatcacacagtgccgcttacgctttggtggcttaccaaaccgcatacttgaaagccaac
tacccagttcaatacatggctgcgttcttatcggcaaacaggtctttccgtgagaaagta
attgtcggcattgaagagtgccgcaggatgaaaatccccgtgctgccaccagatatcaac
ttgagcagttacgacttcacgattgaggaaatcaacgggcaaagggcaataaggttcggg
ttgggagcgatcaaaaatgtgggcgataatgccgttgaggcgatcattcaggtccgaaaa
gagggtggtcctttcacggacatcgcagatttcttgaggcgagttcgcccccaccgttcg
gtcacaagggctgtggttgaaagtttgatcaaagtaggggcatttgacagtttgcatcca
aacaggaaccagttgctgcaggctctggaaatgttgtgggagcaagcggggaaaagcgca
caaccagcggcagggcaagcgactttgttcggcagcgacgcaacggttaaaagcacatcg
gctctgttgctccccgatgtcccagatgtctccatcaaggagaaattggagtgggaacga
gaattgctcggcgttttcttgtcagcgaacccactgcaagcaggatataaagtcgtcgcc
aatcgcatcactcacagtttggatgaattgacggaagtcacttcgggagcgcttgtcaga
atctggggcatggtcgttcacttgcgtccaacagttgacagacagaaccgtccccttctt
tttgccaagttgcaagaccattctggcgctgaagttgagttagttttgagtggcgacaac
taccacgctttcgcccacttgtttgagaaggacgccctcatctatgttgaagggatagtc
aggcacgaagaaccttaccgaccgaacggcagcgaggaagaggagggagaagaggagccc
caacttattgtgcgcatttcccctcgctatgttgagcgatttaccttggaaggtgtttcc
gccgcttctaaacccgttaacggcactaacgattgggtgtcgccaaccccagcgcaacct
aaaccctcaaggcttaagccttccacacccgctgttgattccaaagcgatcgcccatcat
cactttacagaggggactcaaaccgctggcagcaagttgcaactgactttgcctccgaag
ttaaaagaggacgaggcgcaacggttaaaggatttgctgacccgtaaccccggcgaagtc
actgttgaggtcttaatccgcaacggctctgaagtcaaaaggaagcaactacctgtgaaa
gtgaaattgagccgcgagttttacgaacaactcacaaaccttctcgggaaagatgccgtg
caaattatccgctaa
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