Candidatus Fervidibacter sacchari: Q2T83_11745
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Entry
Q2T83_11745 CDS
T09227
Name
(GenBank) GAF domain-containing protein
Organism
fsh
Candidatus Fervidibacter sacchari
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
GAF_2
GAF_3
PAS_9
HATPase_c
Response_reg
PAS_3
PAS
PAS_8
PAS_4
HisKA
SpoVT_C
Motif
Other DBs
NCBI-ProteinID:
WKU15007
LinkDB
All DBs
Position
complement(2546888..2552191)
Genome browser
AA seq
1767 aa
AA seq
DB search
MARRIRKNWQWLLGTVAVVVALLLADGGIRYFAWQTNTQAVNWAVSSVAQRWDEFIKSVV
SQLLFQRTMSIYEDLFVPSKRGVLLRQAGNWIDEMRESVMADFWVVVDDKGQPVAVMPLG
ANLPSLRPLWKAPLKSHPCSIALFAGASSEPSLLGLGTDLMVNGEKRGKLWVLYRLDGLS
QQLCSLPFEASLELATVKGDVLFRVKGARQASISKPFYVSADLNEVPLSLIAAIPPQEMV
KGMGFVRVILLETFALVAIAAALIAIGWRRVADGELAVKLTEIFHSLSERFLETRDAASV
FQELAEAIVREFRFSVAVVFRFDKQLQSFSMAGYAPQRLLREFLNQREDSSALNLSDFVL
QRLQRGSTYISADCHEFFSLTEEETAVQTLQSALNIQLCWGALLFAEGKPVGALFVGTSQ
KQFSGEEIQALELVRQQAGMLITMIDNWEEQIKAQERANRFRDTLLWLNKELPQYNDLTD
QLRLIAKAAQEALEVSQVSIWQISPDHQYTYCVAAAGDVSEQLEGTVLPLSHYLTYTVSL
DEERVIATDSVLTDPRTDELEDYWRLHGIEAAMDAPVRVEGKVVGIVCCEHKAKRQWASD
EVAFAGEIADLVAKVILESQQQRRNRYLATLSQLALQLLASTDWHGVLPVFLEDIGKVAN
ADRTFLAKLETNEQGHEVLRCIGVWSVDGLVEDEHEFILSKVGVPHQIEALKTGEGVSCI
TRTLPEPFRQFYEKRGVKSILVVPVFVESRWWGILGLSARREERYWDDTDIAILKIAGTL
LGSVIERQKAIQRQLEQEKQFRELVENAIVGVYRSTPDGRLLMANPALAKMLGYNSPEDL
IYSVTDLATQVYADPTHREDFKRMVEEQGSVQNFIAPLKRKDGSKIWAAISGRAVYDANG
KLLYYEGFVMDITARKRAEELLTHRVAQLQALYRLASALQQLDGLEEVFGEVVECAKTTL
NADKAFVALIDPDGRVRVKWAESLSEGGRKAIEEFLSQSPNVFLERPLIITDIAKAQELG
SLRDALLSEGVGSYLCVPIISQGKLVGRLNVSFSQPRRFSEDEIDMAQTIAHHLAFAITR
KEAEEQIRRSERKFRSLFENAVVGIYRSTPDGRFLMANETLARINGYSSVEELMALDIPT
QIYLNPEDREQFKKLMAEQGFVADYRYPIKRKDGSIGWVTKWARAVKDDNGKVLYYEGFV
LDITEQVQMEQRLKALQATARSLVMRLDIESVIQVAVSEISHLYPNSAILIFRYREDEDA
FVLESANEEASDLLRVLRLSVGSTLKQRGFPLVEDRLWAGESVLVNDLAQSVGSLAKELT
ELGYRSIFMRGIGDSSQLWGMIAICRRGETFSQQDTEFLNSFCDYLSIAVRNASLFQQVQ
QAYEELRGIQERMIEQERLRALGQIASGIAHDINNALVPIQGFAEILLEHNDPVVRDAAE
VIFKSANDIAATVQRMREFYRVRSSEDVLEPVDLNAICKDALMMTKPKWFNMPRERGIVI
ETRLELADDLPPLTGIPSEIRQAIINLIINAVDAMPEGGILTIRTFRRDKGGRAWAVVEV
CDTGIGMDEETKRRAIEPFFTTKGEKGSGLGLAAVYGTVQRHEGFMEIDSAPGEGTTVRL
WLPSNVAQISELPAGEVPSLKLLVIDDEPSVRETLALLLRKDGHLVLTAADGEEGLEMFQ
LAQIQGNPFNVVITDLGMPRMDGLTVARKIKAISPDTPVILLSGWGFRIRSEEVREAIDL
VLTKPATYQQIRRALSQIWNRRMAITN
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcgaattcgcaaaaactggcaatggcttctcgggacggtggcggtcgtcgtc
gcgttactgctcgctgacggtgggattcgttatttcgcatggcaaacgaacactcaagcg
gtgaactgggctgtttcaagtgttgcgcagaggtgggacgagttcattaagtctgtcgtc
agccaattgctcttccaaaggacgatgagcatttacgaggacctttttgtcccttcaaag
cggggcgttcttctccgtcaagccggtaattggattgacgaaatgagggaatctgtcatg
gctgatttctgggtggtcgttgacgataaagggcaacctgtagcagttatgcctttaggc
gcaaaccttccgtcgttgcgacctttgtggaaagcacccttgaagagccatccgtgtagc
atcgcgttgttcgctggagcgagcagtgaaccttcccttttggggcttgggacagatttg
atggtcaacggggagaagcgtggcaaattgtgggtgctttatcggcttgatggactttcg
caacaactttgcagtcttccctttgaggcatccttggaacttgcgacggtcaagggtgat
gttctcttcagggtaaagggagcgcgtcaagccagcatttccaagccattctatgtttcc
gctgacctgaatgaggtgccactttctcttattgcagcaattcctccgcaggaaatggtc
aaaggcatgggctttgtgcgagtgattttgctggaaactttcgctttggtggctattgct
gctgcacttattgcaataggctggcggcgagtggctgacggtgaacttgctgtcaaactg
acggaaattttccattcactttccgagcgtttccttgagacccgagacgctgcatctgtt
ttccaagagttggctgaagcgattgtccgagagtttcgtttctctgtggcagttgtcttt
cggtttgacaaacaactccagtccttctcaatggctggctatgcccctcagaggttgttg
cgcgaatttttgaaccagcgagaagatagttcggcgttgaatttgtcggactttgtcctt
cagaggcttcaaagaggctctacctacatcagcgcagattgccatgaatttttctcccta
accgaagaggaaacagcggttcaaaccttgcagagtgctttgaacattcaactttgctgg
ggcgctcttttgtttgcggaaggtaagcccgtcggagcactcttcgtgggcacatcgcaa
aagcaattctccggcgaggaaattcaagcccttgagttggttaggcagcaggctgggatg
ctgataaccatgattgacaactgggaggagcagataaaggcgcaagagagggcgaaccgc
ttccgcgacacactactttggctcaacaaggaattgccgcaatacaacgacttgactgac
caattgcgtttgattgcgaaagcggctcaagaagcgctggaagtcagtcaagtcagcatt
tggcagatttcacccgaccaccaatacacttactgtgtcgccgcagcaggcgatgtcagt
gagcaattagaaggaacggtcttgcccttgagccattacttgacctacaccgtctccctt
gacgaggaacgagtgatcgcgactgattcggttctgactgacccgaggactgacgaactg
gaagactactggcgacttcacggaattgaagcggctatggatgcgccagttcgtgttgag
gggaaagtcgttgggatagtttgttgcgagcacaaagcgaagcgacaatgggcaagcgat
gaagtggcgttcgctggcgagatagcagaccttgtggcaaaggtgattttggaatcgcaa
cagcaacgacgcaaccgctacttggcaactctctcccaacttgctttgcaacttttagca
tcaacggactggcacggggttttgcccgtttttctggaggacataggcaaggttgcgaat
gccgacagaaccttcctcgctaaacttgaaaccaacgaacaaggtcacgaggttttaagg
tgcattggagtttggagcgttgatggtctcgttgaggacgagcatgaattcatactgagc
aaagtcggagttccccaccaaattgaggcactgaaaacaggtgagggggtttcttgcatc
accagaaccctaccagaaccttttcgccaattttacgaaaagcgtggtgtcaagtccatc
ctggtcgtccccgttttcgttgaaagccgatggtgggggattttgggattgagcgcacgc
cgtgaggaaagatattgggacgataccgacattgccatcttgaaaatcgctggcaccttg
ctcggcagcgtgattgagcgtcaaaaggcaattcaacggcaactggaacaggagaagcag
ttccgcgaattggttgaaaacgcaatcgttggagtctaccgaagcactcccgacggaagg
ttgttgatggcaaaccctgctttggcgaaaatgcttggttacaatagccctgaagacctg
atttactccgttaccgatcttgccactcaagtctacgctgaccctactcatcgtgaggat
ttcaaacggatggtggaagagcaaggctcagttcaaaacttcatcgccccgttaaagcga
aaggacgggagtaagatttgggctgccataagtgggagggcagtttacgacgctaacggt
aagttgctttactacgagggcttcgttatggacatcactgcccgcaagcgggctgaagaa
cttttgactcatcgggtcgctcaacttcaagccctctacaggcttgcatctgcactccaa
caacttgatggacttgaggaggttttcggagaagtcgtagaatgcgccaagacgacattg
aatgctgacaaagccttcgttgccctcattgaccccgacggcagagtgagggttaaatgg
gctgaaagcttgtccgaaggtggcagaaaagcgattgaggaatttctgtctcagtcgcca
aatgttttcctggagcgccccttgataatcaccgatattgctaaggcgcaggagttagga
agcctgcgagacgcccttttgagcgaaggcgttggttcatacttatgcgttccaatcatc
tctcaaggcaaattggtcggcaggcttaatgtctctttcagccaaccgcgaagattttcc
gaggacgaaattgacatggctcaaaccattgcccatcaccttgcctttgccatcacacgc
aaggaggcggaagagcaaatccgtcgctcagagcgaaagtttcgcagtctgtttgaaaac
gccgtcgttggcatctaccgaagcactcccgatggtcgcttcttgatggcgaacgagact
ctcgctcgcattaatggctacagcagcgttgaagaacttatggctcttgacatcccaacc
caaatctacctcaaccctgaagaccgagagcagttcaagaagttgatggctgagcaaggg
tttgtcgccgactaccgttacccaatcaaacgcaaagacgggagcatcggttgggtcaca
aagtgggcgagggcagttaaggacgataacggcaaagtgctctactatgagggctttgtc
ttggacatcactgagcaagtgcagatggagcaaagactcaaggccttgcaggcgacggca
aggtctcttgtgatgaggctggacatagagagcgtcattcaagtcgctgtttccgagatt
tcgcacctttatcccaattccgccatcctcattttccgataccgagaggacgaagacgct
ttcgtccttgagagcgcaaatgaggaagcgagcgatttgcttcgggttctgcggttaagc
gtcggcagcaccctcaagcagcgaggtttcccactcgttgaggataggctttgggcggga
gaaagcgttctggtcaacgacctcgctcaatctgtcggctcattagcgaaggaattgacc
gagttaggctaccgctcaattttcatgcggggcattggcgattcaagccaattgtggggg
atgattgccatttgccgaaggggtgagactttctcccagcaagacaccgaattccttaac
tccttctgcgactacctttccatcgccgtccgaaacgcttccctgttccagcaagtccag
caagcatatgaggaactgaggggaattcaggaacggatgatagagcaggaaaggctcagg
gctttggggcaaattgccagcggaatcgcacacgacataaacaacgctctcgtgcccatt
caagggttcgctgaaattttgcttgaacacaacgacccagtcgtccgagacgctgcagaa
gtgattttcaagtcggcaaatgacattgctgcgacggttcagaggatgagggaattctac
cgagtgagaagcagcgaggatgtattggagccggtggatttgaacgccatctgcaaagat
gctctgatgatgacgaagccgaagtggttcaacatgccgagggagagagggattgtgatt
gagacgagacttgaactggctgatgatttgccgccactaacaggcataccgagcgaaatc
agacaggcaatcatcaacctcatcatcaacgccgttgacgcaatgcctgagggcggaatt
ttgacaattcgcaccttccgaagggacaaaggcggaagggcttgggctgtcgtggaagtt
tgcgatacaggcatcggaatggacgaggagacgaaacggcgagccattgaacccttcttc
acaacgaaaggcgaaaagggcagtggattgggattggctgccgtctatgggactgtccag
cgacatgaagggttcatggaaattgacagcgccccgggtgaaggaacgaccgttaggctc
tggttaccgagcaatgtcgctcaaatctctgaacttccggcgggggaagtgccttctctg
aaattgctggtcattgacgacgaaccttcggttagggaaacgctcgctttgcttctccgc
aaggatgggcatctcgtcctcacagccgctgatggcgaagaagggcttgaaatgttccag
ttggctcaaattcaaggcaatccattcaatgtcgtcatcacagacttggggatgccgagg
atggacggtttgactgttgcgaggaaaatcaaagcgatttcaccagacacgccggtcatc
ctgctctccggttggggcttccgcatcaggtcagaagaagtgagagaagcaattgacctt
gtgctgacgaagcctgcaacctaccaacaaattcgccgtgcacttagtcagatttggaac
aggcgcatggcgataaccaattga
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integrated database retrieval system
