Candidatus Fervidibacter sacchari: Q2T83_13125
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Entry
Q2T83_13125 CDS
T09227
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fsh
Candidatus Fervidibacter sacchari
Pathway
fsh03030
DNA replication
fsh03430
Mismatch repair
fsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q2T83_13125 (holA)
03430 Mismatch repair
Q2T83_13125 (holA)
03440 Homologous recombination
Q2T83_13125 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsh03032
]
Q2T83_13125 (holA)
03400 DNA repair and recombination proteins [BR:
fsh03400
]
Q2T83_13125 (holA)
Enzymes [BR:
fsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q2T83_13125 (holA)
DNA replication proteins [BR:
fsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q2T83_13125 (holA)
DNA repair and recombination proteins [BR:
fsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q2T83_13125 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WKU15268
LinkDB
All DBs
Position
2839615..2840802
Genome browser
AA seq
395 aa
AA seq
DB search
MPYLLFPQEAQFFRNVRRALTQLYQSARYGKLKPPIVVVFGDDEFLVHRVIQRLTDLLLP
SEERQTSLTILEGKEATEAELAQALFEPTFGFQLTRRRVVILKSPSFLKEQSKRKRDDLV
WYRFLQKVPEGTYVLIALTEQPSNSQLNLLNEIALLIPLSKLRQQDLPEFVQMLAEQSAI
RMDKAAIQELIERVGNDARQLATEIEKLALYIGVDGRVTVDIVRELVPSLAMDVFALMNA
VVEGNAAKALRMLDGLLQRRENPMLILHLLARQFRFLLQARLMLESKLISPALLHARADA
FRQQLEKIPEEFKQRLPEDSRLNLLKQSPAVIRNFLLQARNFSREQIVEALRLILETDVG
FKTGVDQGQQLALLILNLCRMREAAQQVAASPLGQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccttaccttttgtttccgcaagaagcccaatttttccggaatgtcaggcgggcgcta
actcaactttaccaatctgcccgttatggtaagttaaagccgccgattgtcgttgttttc
ggcgatgacgaatttttggtgcatcgggtcattcaaaggttgaccgatttacttttgcca
tcggaagaacggcaaacatccttgacaattcttgaaggcaaagaagcaactgaggcagaa
cttgcacaagcgctttttgaacccactttcggtttccagttaacccgccgacgggtcgtc
atccttaaatcaccctcgttcttgaaggaacaaagcaaacgcaaacgagatgatttggtg
tggtatcgttttctgcaaaaagtccccgaaggcacatatgtgctcatcgccctcaccgaa
cagcccagtaacagccaactgaacttgcttaacgaaatcgctttgcttatccctttgagc
aagttaagacagcaagacttgcccgagtttgtccagatgctggcggaacagtcggcaatt
cgcatggacaaggctgccatccaagagttaatagagcgagtggggaacgatgccaggcag
ttagcaacggagatagaaaagttggcgctttacatcggtgttgacggaagagtgaccgtt
gacattgtccgagaactcgtcccttcgttagcgatggatgtttttgccttgatgaatgct
gttgttgagggtaatgctgcgaaggctttgaggatgcttgacggtttacttcagcgccgt
gaaaacccgatgctcatccttcacttgctcgcccgtcagtttcgtttcttactccaagcg
agattgatgcttgaatccaagttgatttcgccggcacttttgcatgccagagccgatgct
tttagacagcaacttgagaaaatccctgaagagttcaaacagcgtttgcccgaagacagt
cgcttgaacctactcaagcaatcgccagccgtcatcaggaacttcctgctccaagccaga
aacttctcgcgggagcagatagtggaagcccttcgtctcatccttgaaactgatgtcggg
ttcaagacgggcgttgaccaaggtcagcagttggctctcctcatactcaatctgtgtcgg
atgagggaagcagcgcagcaagttgcagcgtcccctttggggcaatga
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