Candidatus Fervidibacter sacchari: Q2T83_14275
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Entry
Q2T83_14275 CDS
T09227
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fsh
Candidatus Fervidibacter sacchari
Pathway
fsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q2T83_14275 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsh03019
]
Q2T83_14275 (rny)
Messenger RNA biogenesis [BR:
fsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Q2T83_14275 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF7669
Spore_YhcN_YlaJ
Neur_chan_memb
Motif
Other DBs
NCBI-ProteinID:
WKU15487
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Position
complement(3096719..3098302)
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AA seq
527 aa
AA seq
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MELWVSVLLGLVIGIVIAAGIVFWAWRTLLIPQQQRLDALRQKVDEERIKADKMQREAEA
KLREAEAKLRDANLLVREELQRERERLEQEYRDRREELLRWERRLSQREEQIDRRMSQIE
QREQTLKQEEQRIQAMRAEVEELHRKAQQELERIAELTPEQARQIILARVEEELQSEIAR
RIYEAEEQIKREAEERAKKIIATAMQRCAVEVASEMTVTTVSLPSEEMKGRIIGREGRNI
RTFELLTGVDLIVDDTPEAVVISCFDPIRRETARLALEMLIADGRIHPARIEEVVEKARQ
EMEQRILQAGQEAARAAGVDNLPEGLLKLLGRLKFRTSYGQNVLDHSVEVAHLAGMMADE
LKVNSKIARRAGLLHDIGKALDHHMEGSHIEIGIDVLRRYGEPEEVIHAVAAHHGDIQPQ
TVEAVLVLIADALSASRPGARRESFEAYIRRLEQLESIAKSFPGVDKAYVIQAGREVRVI
VKPDQVDDVMAAKLAKDIATRIQTETQFPGQIKVTVIREVRAVEYAR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaactttgggtatcggttttgctcggactggtcatcggcatcgtcatcgcagcaggc
atagtcttttgggcgtggcgaaccctcctcatccctcaacagcaacgcttggacgctttg
aggcaaaaggtggacgaggagagaatcaaggctgacaagatgcaacgagaggctgaagcg
aaactgagggaagcggaggctaagttgagggacgccaacttgcttgtccgagaagaactg
cagcgagaaagggaaaggcttgagcaagagtatcgggacaggcgagaggaacttttgagg
tgggaaagacgcttgtcccaacgcgaggagcaaattgaccgaaggatgagccaaattgaa
cagcgagagcaaacgctcaagcaggaggagcagcgaattcaagcgatgcgagcggaagtt
gaggaactgcaccggaaggctcaacaggaacttgagcgaatcgccgaactgacacccgag
caagcaaggcaaatcatcttggcaagggttgaagaggaactccagtcggaaatcgcacgc
cgaatctatgaagccgaagagcaaatcaaacgggaagcagaagagagggcgaagaaaatc
atcgctacggcgatgcaaaggtgcgccgttgaggtggcttcggagatgactgtgaccacc
gtttcgctcccgtccgaagagatgaaggggcgaatcatcgggcgcgaaggtcgcaacatc
cgaacttttgagttgctgacgggtgttgacttaatcgttgacgatacgcccgaagccgtt
gtgatttcctgctttgacccaatcaggcgggagacggctcggttagcgcttgaaatgctc
atcgctgacgggagaatccaccctgcccgaattgaagaagtcgtggagaaggcgaggcaa
gagatggagcagcgaattctgcaggctggtcaggaggctgcgagggctgcaggggttgat
aacttgccagaaggtctgctgaagttgctcggtcggctcaagttccgaaccagttacggt
caaaatgtccttgaccattccgttgaggtcgcacacctcgccggcatgatggctgacgaa
ctgaaagtcaacagcaaaattgcgagacgggcagggttgcttcacgacattggcaaagcg
ttggaccaccacatggaaggcagccacattgaaatcggcatagatgtccttcgccgatac
ggcgagcccgaggaagtcatccacgccgttgctgcccatcacggcgatatccagcctcaa
actgttgaggctgtgcttgtcctgattgccgacgccctatccgcatcaagacctggtgct
cgccgtgaaagttttgaagcctacatccgaaggcttgagcaacttgagagcatcgccaag
tccttccctggcgttgacaaagcctatgtcatccaagcggggcgggaagtccgggtcatc
gtcaagcccgaccaagttgatgatgtcatggcggcgaaactggcgaaggacatagccacc
cgcattcaaaccgaaacccaattcccagggcaaattaaggtgaccgtcataagagaagtc
agggctgttgaatatgcccgctga
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