Candidatus Fervidibacter sacchari: Q2T83_16110
Help
Entry
Q2T83_16110 CDS
T09227
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fsh
Candidatus Fervidibacter sacchari
Pathway
fsh00061
Fatty acid biosynthesis
fsh01100
Metabolic pathways
fsh01212
Fatty acid metabolism
fsh02024
Quorum sensing
fsh04146
Peroxisome
Module
fsh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fsh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Q2T83_16110
00071 Fatty acid degradation
Q2T83_16110
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Q2T83_16110
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q2T83_16110
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fsh01004
]
Q2T83_16110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fsh04147
]
Q2T83_16110
Enzymes [BR:
fsh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Q2T83_16110
Lipid biosynthesis proteins [BR:
fsh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Q2T83_16110
Exosome [BR:
fsh04147
]
Exosomal proteins
Exosomal proteins of breast milk
Q2T83_16110
Exosomal proteins of breast cancer cells
Q2T83_16110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
NAD_binding_4
Acyltransferase
Sterile
PP-binding
AMP-binding_C
Epimerase
ACP_SdgA_C
AMP-binding_C_3
3Beta_HSD
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
WKU15845
LinkDB
All DBs
Position
3491699..3496108
Genome browser
AA seq
1469 aa
AA seq
DB search
MGWVRDFYTGKTLMITGATGFLGKALVEKVLRSLPEVRRIYLLVRGKRLADGSWLSAHER
MRQEFLRSAIFTALRRHYQDKFEEFIAQKVVVLEGDLSFERLGLDEMTFDAVASETDVII
NSAAVVSFDERLDRALNLNTLGVRRVLELAKRGKELREPQGKPSPIFAHISTCYVCGIRN
GIIPEEPPDPTGVDEEIAELLQICHDVEGQSGDDETPPPIRERTIREAMVDEGMKRAKLR
GFNDTYTYTKWLGERLLVKECDDIPTLILRPAIIESTLREPEPGWIENQRMADPLIIGFA
ERKLVDFPGDPDCVVDLIPCDFVVNAVLAAIAMMGQGTWDTGHGINRPPSLVPRLVVLQI
ATSTQNLLTLRDVVRWCVEYFERNPLLDRNGRPLKVKPWTLPSLDKYRRWLERRKRLLEL
QEKLAHSFSLLPVARQWQRRLGVVKAALERLEYFLSIYAPYTHFKAKFATENLQQLWESL
DEEDKRDFPFDVTTIDWRHYLQEVHIPGLKRHILRMAEDDGAADSIQTLPDLLAHAAARF
PQKVALQRKGQGTRDGGQGKEWVRYTYGELHRLAQSNAKQLAAMGIGRSDRVILCGDNCP
EWVIAYFSASCAGATVVPLDRQWRPEDIAHIAQFVGAKAALLGDSIAESIGAALRAIGLD
IPIVTFSQLASGEWRIANSEHSTPRTPHPDDIASIIFVTGPAVEPRGAMLTHRNFLSNLR
AIVKVLPPMQSDHCLNLLPLHHAFAFTSELLVTMWAGATITYPENLRSRTVLETMKEVGI
TVLIGVPRVFQILHESIHAEVRRRGKWAWLLFQMLKKFSLAALKLTGRNIGRSLFASVHR
QFGGKLRALISGGAALPPHIFDDFTAMGFLLCEGYGLTEASPVVSVNPMHRPKRGSVGKP
LPGVEVLIADPDEHGVGEILVRGPNVFVGYFRNPEATERILKNGWLHTGDLGRFDRDGYL
YITGRVKDVIVTAAGKNVYPEELERKLAGIAGVKELCVVGVWDEETMGERPHLVVVPEPQ
WASSPERLNEFERRLREEVQKRSQNLPSYQRIAQVHIVTDELPKTVALAPDRAAVRAMIT
GRGTRDAGRVQFAPTTVPASIATHSAIIEPIVSAIAHLTKQPKEKVTLSSRLDELGIDSL
LRVELTALLETRFRISLPEAQIAEAQTVGEIVELLAERLGGTVPETVPPEDGAALVITRL
LSPEARKEAERWIRETRFQRWARHLTCQLLRWAYRRWFDFEAHGLENLPEQGPFIIAANH
SSHMDTGAIIVAFAERDEARKRARVHAKELRTAPRTSHLASDTRPSSLAPRPIFVLGARD
YFFNTPLKGWFFHTFLRVVPFDRTTNPLEGLRIAAAILQAGYPLLIFPEGTRSVTGKLQP
FKPGLGLLAIETGVPIVPALIEGTFEALPKGRLIPRRSKIKVTFGEPVKVEMLVTDRKVL
AEIPPSERRELYQRLTEEVRQRLITLQRG
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgggttgggttcgtgacttctatacaggcaaaacactgatgatcacgggggcgacggga
tttttgggcaaggcgttggttgagaaggtgcttcggtcgctgccagaggtgcgacgcatt
tatctgctcgttcgcggcaagcggttggctgacggttcgtggttgagcgctcatgagcgg
atgcggcaagaatttctccgttccgccatcttcaccgccttgcgccgccactaccaagac
aagtttgaggaattcatcgctcaaaaagtcgttgtccttgaaggcgatttgagttttgag
cggctcggtcttgacgaaatgacctttgatgctgtcgcttccgagaccgatgtcatcatc
aatagcgctgccgtcgtttcctttgacgagcgattggacagggcgctgaacttgaacact
ttgggcgttcgcagggttttggagttggctaaacgaggcaaagagttgcgcgaaccgcag
ggcaaaccgtcccccattttcgcccacatctccacttgctatgtgtgcggaatccgcaac
ggaatcatcccagaagaaccgccagacccgaccggcgttgatgaagagattgccgaactt
ttgcaaatttgccacgatgttgaagggcaatcaggtgacgacgagacaccgccgcctatc
cgtgagcgaactattcgggaagcaatggtggacgaagggatgaaaagggcaaagttgcga
ggcttcaacgacacatacacctacacgaaatggctcggcgagcggctattggtgaaagag
tgcgatgacatcccaacgctcatcttgcgtcccgccatcattgagagcactttgcgtgaa
cctgaacccggctggattgaaaaccaaaggatggctgacccgctaattatcggcttcgcc
gagcgaaaactcgttgacttccccggtgaccctgactgcgtcgttgacctgattccatgt
gacttcgtcgtcaatgctgtgcttgccgccatcgcgatgatgggacaagggacatgggac
acgggacacgggattaaccgtcccccgtcactcgtcccccgcctcgttgttttacagatt
gccaccagcacccaaaacttgctgacgctgcgcgatgtggttaggtggtgcgttgagtat
tttgagcgcaacccgctcttagaccgcaacgggcgaccgctgaaagtcaagccctggacg
ctcccttcccttgacaaatatcgccgctggttggaaaggcgaaaaaggttgttggagttg
caagagaagttggctcattcgttctctttactgcctgtcgccagacagtggcagcgaagg
cttggagtcgtcaaagcggcgttggagcggcttgaatacttcctcagcatctatgccccc
tacactcacttcaaagccaagttcgccaccgagaacttgcagcaactttgggagagtttg
gacgaagaggacaagcgcgatttcccctttgatgtgacgaccattgactggcgacattac
ctgcaggaggttcacattcccggcttaaagcggcacatcctgcggatggcggaagatgac
ggcgcagccgatagcattcaaacgctcccagatttgttggctcatgcagccgctcgcttt
ccccaaaaggtggcactgcaaaggaaggggcaagggacaagggacgggggacaggggaaa
gaatgggttcgctacacctacggggaattgcatcggttagcacaaagcaacgcaaagcaa
ctggcagcaatggggattgggcgcagtgacagggtgattttgtgtggcgataactgtccc
gagtgggtcatcgcttatttcagcgcgtcttgcgctggcgcgaccgtcgtgccccttgac
agacaatggcgtcccgaagacatcgctcatatcgcccagttcgttggagcgaaggcagcc
ttgttgggtgacagcatcgctgaatccataggcgcggcgctaagagcaattgggcttgac
atacctatcgtgactttcagccagttggcgagtggcgaatggcggatagcgaatagtgag
cactccacaccccgcaccccgcacccagatgacatcgcttccatcatcttcgtcacaggt
ccagccgttgagccgaggggcgcaatgttaacccaccgcaactttttgagcaacttgaga
gccattgtcaaggtcttgccgccgatgcaaagtgaccactgtttgaatttgctccctttg
caccacgcattcgctttcacaagcgagttgctggtgacaatgtgggctggagcaaccatc
acttacccagaaaatttgcgctcccgcaccgtgttggagacgatgaaggaagttggcatc
actgtcctcatcggcgttccccgagtgtttcagattctgcacgaaagcattcacgcagaa
gttcgccggcgtggcaagtgggcttggctgctgttccaaatgctcaagaagttcagcctt
gcggctctgaaactgacaggaaggaacattggacgcagtctttttgcttccgtccaccgt
caatttggtggcaaacttcgggcgctaatcagtggcggtgctgcgttgccgcctcacatc
tttgacgatttcacggcaatgggatttttgctttgcgagggctacggtttgacagaggca
tcacctgtcgtctctgtcaaccccatgcatcgccccaaacgcggttcagtgggcaaaccg
ctgccaggcgtggaagtcctcatcgccgatcccgacgaacatggtgtcggcgagattttg
gtgcgaggtccgaatgtcttcgtcggttacttccgaaacccagaagcaacggaacggatc
ttgaaaaacggttggcttcacacaggcgacttgggcaggtttgaccgagacggttacctt
tacatcactgggcgagtcaaagatgtcatcgtcactgcagccggcaaaaatgtctatccc
gaggaactggagcgaaaattggctggcattgcgggtgtcaaggaactttgcgtcgtcggt
gtttgggatgaggagacgatgggagagcgaccgcatttggttgttgtgcccgaaccacaa
tgggcaagttcgcctgaacggttgaacgaatttgagcggcggttgcgtgaagaagtgcaa
aaacgctcacaaaacttgccatcttaccaacgcatcgcccaagtccacatcgtcaccgac
gagttgcccaagaccgtcgccttagcgcctgaccgagcggctgtccgagcgatgataacg
ggacgggggacgagggacgcgggacgagttcaatttgctcccaccactgttcctgcatcc
atcgcaacgcactctgcaattattgaacccattgtctctgctatcgctcacctgacgaag
cagccaaaagagaaagtcaccctttcctcgcgacttgacgaacttggaattgactcgctt
ttgagggttgaactgacagcgttgctggagactcgttttcgcatcagtttgcctgaggct
caaatcgctgaggctcaaacggttggcgaaatagtggaactgcttgcggaaaggttgggc
ggaactgttcctgaaaccgtcccacctgaagatggggcggcattggttatcacgaggctg
ctctcgccagaagcccgcaaagaagcggaacggtggattcgcgaaacccgattccaacgg
tgggctcggcatttgacttgtcagttgctgaggtgggcatatcggcgttggtttgatttt
gaggcacacgggcttgagaacttgcccgaacaaggtcctttcatcatcgccgccaatcac
tcatcccacatggacacaggcgctatcattgttgcgttcgctgaacgagacgaagcgcgc
aagcgtgcaagggtgcatgcgaaagaactccggactgcaccccgcacttcgcacctcgca
tctgatactcgtccctcgtccctcgcccctcgtcccatcttcgtcttaggcgctcgcgat
tacttcttcaacacgccgcttaagggctggttcttccacacctttttgcgggtcgtgcct
tttgaccgaacaacgaacccattggaaggcttgaggattgctgctgctatcctgcaggca
ggttacccgctgctcattttccctgaagggactcgttctgtcactggcaaacttcaacct
ttcaaaccgggcttggggttgctggcaattgagacaggtgttcccatcgtgccagcactc
attgagggcacatttgaagcactgccgaagggaaggttgattccgaggcgaagcaaaatc
aaggtcacctttggcgaaccagttaaagttgagatgttggtcaccgaccgaaaggtttta
gcagaaatcccgccttcggagcgtcgggaactttaccaacgcctcactgaagaagtgcgc
caacgcctcatcacattgcagcgggggtga
DBGET
integrated database retrieval system
