Candidatus Fervidibacter sacchari: Q2T83_16950
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Entry
Q2T83_16950 CDS
T09227
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fsh
Candidatus Fervidibacter sacchari
Pathway
fsh03030
DNA replication
fsh03410
Base excision repair
fsh03420
Nucleotide excision repair
fsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q2T83_16950 (polA)
03410 Base excision repair
Q2T83_16950 (polA)
03420 Nucleotide excision repair
Q2T83_16950 (polA)
03440 Homologous recombination
Q2T83_16950 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsh03032
]
Q2T83_16950 (polA)
03400 DNA repair and recombination proteins [BR:
fsh03400
]
Q2T83_16950 (polA)
Enzymes [BR:
fsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q2T83_16950 (polA)
DNA replication proteins [BR:
fsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Q2T83_16950 (polA)
DNA repair and recombination proteins [BR:
fsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Q2T83_16950 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q2T83_16950 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_2
HHH_5
DUF8001
DNA_pol_A_exo1
HHH
GKRP_SIS_N
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
WKU16006
LinkDB
All DBs
Position
3674216..3676933
Genome browser
AA seq
905 aa
AA seq
DB search
MPKLVVVDGHSLLFRAFFAVPPLSTKDGTPTNAVYGFLRMLIKLWREEKPDYLVVTFDAP
TPTFRHRAFAEYKATRAKAPDAFRPQVILVKQVLKTMGIPFWEIEGYEADDLMGAAVQQA
KQKGLQVVLVTGDMDALQLVGDGVTVLMPKRGISEMERYDAERVKQEFGVPPELIPDLKG
LAGDTSDNLPGVPGIGEKTAKELLQQFGSLEAVLENALKITVPRIRENIVRFAEQAKLCK
QLATIKTDAPLELNLPELAVSNWRIRTMETAEMLLQLEMRSLLEELGLTDLLRDQQAVKG
RVITAEHEWQELLNAVRQHGRVAVAVDVVGAGRTAALRGFALAFGNEVAYVTGEGREGEA
DQVFGSLFAPTGQKSTSVKDRLLALLSDPTIVKVAHGFKELFHQIKIGVDELERIGRDPH
GFEDTELLAYLLNPGQSDYELQRIALERKVATKWQIDWQDSTQREFKISAPTSVCELALT
VAELSPILEREVKEAEMWELWEHVEMPLIFVLTDMERHGVLIDVNYLRQLGEEMMRASKQ
VEERIHQIAGVRFNIRSPQQLAEVLFNRLKLPMPKRTPSGKPSTAAPVLEALAKEHEIAR
LVLEFRELEKLRSTFVEGLLSAADPQHRVHTTYDQTGTATGRLASSEPNLQNIPARGDWG
KKIRRAFIAPKGYRLISADYSQIELRILAHLSGDEALCQAFERGEDIHTQAAVSVFGVKP
EEVTEDMRRKAKVLNFGIAYGISAYGLAQQLGIEPEEAQQIIDRYFERFPKVRNYIEQII
EFARQHKFVRTLMNRRRFLPDIDNPDQRLREAAQRAAINTPVQGTSADIMKAAMVTVWRG
LKERGYDAHITMQVHDELVLEVAENQVLEVAKFVKRQMESVFKLRVPLVAEIKVGDNWGE
MERIL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaactggttgtcgttgacggtcacagtttgttgttccgtgcctttttcgctgtc
ccgcccctttccacgaaagacggaacgcccacgaatgctgtctacggctttttgaggatg
ctgataaaactctggcgcgaagagaagcccgattaccttgttgtgacttttgatgccccg
acacctacattccgccaccgagcctttgccgaatacaaagcgacgagggcaaaagcgccc
gacgctttccgaccgcaggtcattttggtcaagcaagtgctcaagacaatgggcatcccc
ttttgggaaattgagggctacgaagccgacgatttgatgggtgcagccgtccagcaggcg
aaacaaaaaggcttgcaggtcgttttggtcacgggtgatatggacgcccttcagttggtc
ggcgatggagtaaccgttttgatgcctaagcggggcatcagcgagatggagcgatacgat
gctgaaagagtcaagcaagagtttggcgttccgcccgaacttatcccagacctgaaagga
cttgccggagacacttccgataacttgcccggcgtccccggaattggagagaagacggca
aaagagttgttacaacagtttggttcccttgaagccgttttggagaacgctttgaagatc
accgtccctcgcataagggaaaacatcgttcgcttcgctgagcaagcaaaactttgcaag
caactcgcaaccatcaagaccgatgccccgttggaattgaatttgcctgaacttgcggtc
agcaattggagaatccgcacaatggaaactgcggaaatgctcctgcagttggagatgcga
agtctgttggaggaattgggcttgacagaccttttgagagaccagcaagcggtcaaggga
agggtgatcacagcggagcatgagtggcaggaacttctcaacgctgtcaggcagcatggt
cgcgtcgctgtagcggttgatgtcgttggtgctgggcggactgctgctctgcgtggcttt
gctttggctttcggcaacgaagtcgcttatgtgacgggggaaggaagagaaggggaggcg
gaccaagttttcggttcccttttcgcccccaccggtcaaaagagcacttctgtcaaggat
aggcttttggcgcttttgagcgacccaacaattgtcaaggtcgctcacggcttcaaggaa
ctcttccaccagatcaaaatcggcgttgatgaactggaacgaattggtcgcgacccgcac
ggttttgaggacactgaactgctcgcttaccttctcaacccaggtcaaagcgattacgaa
cttcaacggattgcccttgagcgaaaggttgcgacgaagtggcaaattgattggcaagac
tcaacccagcgagaattcaaaatctccgcgcccaccagcgtttgtgaactcgctttgacg
gtcgcggaactttcgcccatccttgagcgtgaggtcaaagaggctgagatgtgggaactt
tgggagcatgttgagatgcctttgatttttgtcttgacggacatggagcggcacggtgtc
ctgattgatgtcaattacttgcgacaattgggcgaggagatgatgcgagccagcaaacag
gttgaagaacggattcaccagattgcgggcgttcgtttcaacattcgctcaccgcaacaa
cttgccgaagttttatttaaccgcttgaagttaccgatgccgaaacgaacgcccagcggg
aaaccgtcaactgctgcacctgttttggaggctttggctaaggagcacgaaattgccagg
ctcgttttggagtttcgcgaacttgagaaattgcgaagcaccttcgttgaaggtttgttg
agcgccgctgacccacaacatcgcgtccacacaacttacgaccaaactgggacggcaaca
ggaagacttgcttcttccgaacctaacttgcaaaacattccggcaaggggcgattggggc
aagaagattcgccgcgctttcatcgcacctaagggctacaggctcatcagtgccgattac
tcgcaaattgaattgcggattttggctcacctttccggtgacgaagccctatgtcaagcc
tttgagcgaggcgaagacatccacactcaagcagccgtcagcgtctttggggtaaagcct
gaagaggtcacagaagacatgaggcgcaaggcaaaagttctcaacttcggcatcgcctac
ggcatcagtgcttacgggcttgcccaacagttgggtattgaacctgaggaggcgcagcaa
atcattgacagatactttgagcgttttcccaaagttcgcaactacattgagcaaatcatt
gagtttgcacggcagcacaagttcgtcaggacattgatgaaccggcgaaggtttttgcca
gacattgacaacccagaccaacggctcagagaggcagcccaacgagccgccatcaacact
cccgtccaaggcacaagtgccgacatcatgaaggctgctatggtgactgtctggagagga
ttaaaggaacggggatatgacgctcacataacgatgcaagttcacgacgagttggtgttg
gaagtggctgagaaccaagtccttgaggtagcgaaatttgtcaagcggcagatggagagt
gtcttcaagttgagagtgcctttggtagccgaaataaaggtcggtgacaactggggcgag
atggagcggattttgtga
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integrated database retrieval system
