Candidatus Fervidibacter sacchari: Q2T83_18000
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Entry
Q2T83_18000 CDS
T09227
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fsh
Candidatus Fervidibacter sacchari
Pathway
fsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q2T83_18000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsh03019
]
Q2T83_18000
03016 Transfer RNA biogenesis [BR:
fsh03016
]
Q2T83_18000
Enzymes [BR:
fsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Q2T83_18000
Messenger RNA biogenesis [BR:
fsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Q2T83_18000
Transfer RNA biogenesis [BR:
fsh03016
]
Prokaryotic type
tRNA degradation factors
Q2T83_18000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_RRP5
KH_KhpA-B
YafT
S1_2
Motif
Other DBs
NCBI-ProteinID:
WKU16203
LinkDB
All DBs
Position
3902045..3904264
Genome browser
AA seq
739 aa
AA seq
DB search
MRAIVVQREVAGQTFSLETGFLAPQADAAVVARCGDSMVLVTVVRSKEVKAGIDFFPLVV
DFEERMYAAGRIPGHRFLRREGRPSDQAILTARLIDRSIRPLFPKGALNDVQVIVTALSF
DYENSLDILGLLGASAALTISDIPFDGPVVGVRIGLFDDEFVINPPFKRLEASKLDLVVA
STKDAVVMIEAGAHQIPEKQMMDAIMKAYEVAQPLIEMQEELREMVGKDKVPFTTLLPDE
ELTTAVRERYGSAIKDAVLQLSKEEREKKVKELREQVIAELTETVPEDKLVLLPLSFDEA
LHRIVREMILNEGIRPDGRGYSDIRPITCAVGISPRAHGSGLFQRGETQVLTIATLGATS
EEMLVETILEEEVTKRFMHQYNFPPYSTGEVRPLRGPSRREIGHGALAERALEPVIPDED
TFPYTIRLVSEVLSSNGSTSMASVCGSTLALMDAGVPIAAPVAGISIGLVMENGRYALLT
DIQGMEDAHGDMDFKIAGTRQGITAIQLDLKIKGLPFEVIERALERAKEAREFILDRMAE
VIDKPRPELPPHAPRIISIKIPTEKIGEVIGPRGKHIKHIQRETDAIIDIQPDGTVFITC
PSLAQAEKAAEMIRLYAADPEVGKVYKGRVTRIMPFGALVEILPGKEGLLHISQISHERI
TSVSDVLKVGDEIEVKVLGVEPDGKITLSRKELLPPPTRLTVRSPSVGGTGPRPRLGGTH
SRPPQRREPGGEGSHSPRR
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagagcaatagtcgttcaacgggaagttgctggtcaaactttctccttggagacaggt
tttctggcacctcaagcagatgctgccgttgtcgcgcgatgtggcgacagtatggtttta
gtcacggtcgtccgctcaaaagaggtaaaggcagggattgacttcttcccgttagtcgtg
gactttgaggaacggatgtatgctgcagggcgtataccgggacaccgcttcctgcgccgt
gaagggcgaccgagcgaccaagcgattctgacagcccgcttgattgaccgctccattcgc
cctttgttccccaaaggtgctttgaacgatgtccaagtcatcgttactgccttgtctttt
gactacgaaaactcgctggacatcctcggtttgctcggtgcaagtgcagccttgacaatc
tctgatatcccttttgatggaccggttgtgggtgtccgcataggtctctttgacgacgag
tttgtcatcaacccgcctttcaagaggttggaggcaagcaaacttgatttagtggttgcg
agcacgaaagacgccgtcgtgatgattgaggctggggctcaccaaatcccagaaaagcaa
atgatggacgccatcatgaaagcctacgaggtcgcacaaccgttgattgaaatgcaggaa
gaactgagggagatggtgggcaaagataaagtgcccttcacgactttgttgcccgacgag
gaactcacgaccgctgttagggaacgctatggaagcgcaatcaaggacgcagtcttgcaa
ctcagcaaggaagagagggagaagaaagtcaaggagttgcgggagcaggtgattgcggag
ttaacggagacggtgccagaggacaaactggttcttttgccactttcctttgatgaagct
ctccaccgcatcgttcgggagatgattttgaacgagggcatccgcccggatgggcgcggt
tattcagacattcgccctattacctgtgccgtcggaatttccccgcgagcacatggctcc
gggttgttccaaaggggcgaaacgcaagtcctaactattgcaaccctcggtgcgaccagc
gaggagatgttggttgagacaattttggaagaagaagtgacgaagcggttcatgcaccaa
tacaactttccaccatactcaacgggcgaagtgagaccgttgaggggaccgtcgcggcgg
gaaatcggacacggtgctctggctgagcgagccttggaaccggtcatcccagatgaagac
actttcccttacaccatccgtttggtttctgaggttctgagttcaaacggctcaacttct
atggcttcagtttgcggtagcactttggcgttgatggacgcgggagtcccaattgctgcc
cctgttgcaggaatctccatcgggttagtcatggaaaacgggcgctacgctctcttgaca
gacatacaagggatggaagatgctcatggtgacatggactttaagattgccggaacccgc
caaggcatcactgccatccagttggacctgaagatcaagggcttgccttttgaggtcata
gaacgagccttggagagggcaaaggaggcaagggagttcatcttggacaggatggctgag
gtcattgacaagccgcgccccgaattgcctcctcacgcacctcgcatcatctcaatcaaa
atccccaccgagaagattggagaggtcatcggtccgaggggcaagcacatcaagcacatc
cagcgagaaactgatgccatcattgacatccagcccgacgggacagttttcatcacttgc
ccgagtttggcgcaagcggaaaaagcagccgaaatgattaggctgtatgccgctgatcca
gaagtagggaaagtttacaaaggcagggtgacaaggattatgcccttcggcgcgctcgtg
gaaatcttgcccggcaaagaggggctcttgcatatctctcagatcagccacgagcgaatc
acatccgtcagcgatgtgcttaaagttggcgacgagatagaggtcaaagttttgggtgta
gaacctgacgggaaaatcactttgagccgaaaagagttgctgccaccacctactcgcttg
accgtccgctcgccttccgttggagggacaggaccaagaccaaggcttggcggcactcac
tctcgcccaccgcagcgccgtgaaccaggtggagaaggttcgcactctccgagaaggtaa
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