Flexistipes sinusarabici: Flexsi_0432
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Entry
Flexsi_0432 CDS
T01539
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fsi
Flexistipes sinusarabici
Pathway
fsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Flexsi_0432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsi03400
]
Flexsi_0432
Enzymes [BR:
fsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Flexsi_0432
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Flexsi_0432
DNA repair and recombination proteins [BR:
fsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Flexsi_0432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Glu2-Pro
Ribosomal_S13
DUF7443
Motif
Other DBs
NCBI-ProteinID:
AEI14120
UniProt:
F8E8Z6
LinkDB
All DBs
Position
453380..454177
Genome browser
AA seq
265 aa
AA seq
DB search
MPELPDVTYFKHYIDRVALHKKISAVQCDDERVLKNTNCQGLNRILKGEKFAGTKRRGKF
LIINLANSGKMLILHFGMTGNISYRESEAKTEDEKKYSQLTIEFHNGSRLFWINKRLLGS
VHLVDKVDEVATIKEMGPDALELSENLFLKLLSKHERKNIKAFLMDQSNIAGLGNEYSNE
LLFQADIDPHRKIKGLGNPERKNIYKVMRDMLEKAIEIGVPVNPFPDDWLLAHMDDMTCP
KDVKHNLKKERIAGRTAVYCPVHQV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcctgatgtaacctatttcaagcattatattgaccgagttgcgctccat
aaaaaaatatcagctgttcaatgcgacgatgagcgtgtcttgaaaaatacgaattgtcag
gggttgaatcgcatactcaaaggagagaagtttgcaggaacaaaaaggcgtggtaagttt
ttgataataaatctcgccaactccggtaaaatgctgattttacacttcggtatgaccggt
aatatttcttaccgtgagagtgaagccaagacggaggatgaaaaaaaatattctcaattg
acaattgaatttcataacggatcgcgtttgttctggattaacaaacgtcttttgggttcc
gtacatttggtggacaaggttgatgaagttgcaacgattaaggaaatgggaccggacgca
ttggagctttccgaaaatttatttttgaaacttttgtcaaaacacgagcggaagaatatt
aaagcatttttaatggatcagtcaaatatagccggcctgggaaacgagtattctaatgaa
ttgttatttcaggcggatatcgatccgcacagaaagattaaaggtttaggtaaccctgag
cggaagaatatttataaagtgatgcgtgatatgcttgagaaagcaattgagatcggtgtg
ccggttaatccgtttccggatgactggcttttggcgcatatggatgatatgacatgccct
aaagacgtaaagcataatttgaaaaaagaaagaattgcgggacgcacggcagtttattgt
ccggtacatcaagtgtag
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