Flexistipes sinusarabici: Flexsi_1055
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Entry
Flexsi_1055 CDS
T01539
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
fsi
Flexistipes sinusarabici
Brite
KEGG Orthology (KO) [BR:
fsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsi03019
]
Flexsi_1055
Messenger RNA biogenesis [BR:
fsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Flexsi_1055
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
YfbR-like
HDOD
Cas3_HD
tRNA_anti_2
DUF5776
LAMB1
DUF7201
Motif
Other DBs
NCBI-ProteinID:
AEI14712
UniProt:
F8E5T1
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All DBs
Position
1109497..1110414
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AA seq
305 aa
AA seq
DB search
MNLNVSGEKYMIFEINHNVTKDSRPYIRVILTDKDGKRHNGIMFDSNKLDFTPEKGDIVS
VEAVVQNYNGQIQLKISNMEKLGEESRLDFLPKTQFNIQDMFDELKEIMDKNVKEQPLRK
LVKLFFGDSKTIKLFKYMPAAKNVHHAYVGGLLEHTLSVAKLAEKMCGYYKEYVNPDLLM
VGALFHDIGKIFELNAEKGFDYTDSGKLVGHLLLGIELINNYIAQVEDFPENYKYIIDHM
IASHHGLLEFGSPKKPKTTEAIILHHIDDMDAKVNTFNSIFEKEEVQEGWSSYDRLLERQ
LYRHS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaacgtaagcggtgaaaaatatatgatttttgaaataaatcataatgttact
aaagacagcagaccttacataagggttattttaacagataaagacggaaaacgtcataac
gggataatgtttgacagcaacaagcttgattttactcctgaaaagggggatatagtttcc
gttgaagcagtggtgcagaattataacggtcagattcagctaaaaatatccaatatggaa
aaacttggagaagagagcagacttgattttcttcccaaaacccaatttaacattcaggat
atgtttgatgagctaaaagagattatggataagaatgtgaaggaacagccgctcaggaaa
cttgtaaaactgttttttggagacagcaaaacaataaaactatttaaatacatgcctgcg
gctaagaatgtacatcatgcttatgtgggcggacttctggagcataccctctcagttgca
aagttagctgaaaaaatgtgcgggtattacaaagaatatgttaacccggatttgctgatg
gttggtgctctttttcacgatatcggaaagatttttgaacttaatgctgaaaagggcttt
gactatacagattcgggcaaacttgtggggcacctgctgctgggaatcgagcttatcaac
aactatatagcacaagtggaagatttccctgaaaattataaatacattattgatcatatg
atagccagccaccacgggctgcttgagttcggttcacccaaaaagcccaaaactacagaa
gctataattcttcatcatatagatgatatggatgccaaggttaacacatttaattcaatt
tttgagaaagaggaagtgcaggaaggatggagttcatacgacaggctccttgagagacag
ctttaccgtcacagttaa
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