Flexistipes sinusarabici: Flexsi_1133
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Entry
Flexsi_1133 CDS
T01539
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
fsi
Flexistipes sinusarabici
Pathway
fsi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Flexsi_1133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsi03400
]
Flexsi_1133
DNA repair and recombination proteins [BR:
fsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Flexsi_1133
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Flexsi_1133
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
SWI2_SNF2
AAA_30
AAA_22
Kinesin
Microtub_bd
AAA_7
DUF87
AAA_lid_SMAX1
Motif
Other DBs
NCBI-ProteinID:
AEI14789
UniProt:
F8E6F2
LinkDB
All DBs
Position
1196198..1198174
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AA seq
658 aa
AA seq
DB search
MTFDLVSDYQPTGDQPEAISQLVQNYRNGKKREVLLGVTGSGKTFTMANVIQQLEVPTLI
IAHNKTLAAQLYGEFKRFFPDNAVEYFVSYYDYYQPEAYVPQSDTYIEKDSSINDNIDKM
RHSATRSLLERRDVIIVASVSCIYGLGSPEAYYGMLVTLETGDDRSMEEVLQKLVDIQYD
RNDYDFHRGVFRVKGDTIEVFPSHEDSLAYRIEFFGDEVERLSEFDPITGKTIKERPKIA
VYPNTHYVTSAVSVDKIIKQIKSDLLERTAILEKENKLVEAQRLTQRTMYDIEMIEETGY
CNGIENYSRYFDGRNPGDTPPTLLSYLPEDSLVIVDESHITIPQVRGMFKGDRSRKSTLV
EFGFRLPSALDNRPLRFDEFNKRLDKVLYVSATPADFEITDSGNTVVEQIIRPTGLMDPA
IEVRPAKNQVDNLFSEINSIVEKGERILVTTLTKRMAEDLTRYYKEMGLRVEYLHSEIDT
LERIKIIRELRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSDRSLIQTIGRA
ARNVNGKAIFYADKMTKSMKFAIDETNRRRKKQQLYNEKHGITPETIKSEITNILDSIYE
KDYVTVEIEDDAVERLLTGDRKKDIEVMEKEMYKASEELDYEKAAKIRDMLFEYKAKK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgatttggtatcggattaccagcccaccggtgatcagccggaggcaatctcg
cagcttgtccaaaattatcgtaatgggaaaaaaagagaagtgcttttgggtgttacaggc
tccggcaaaacattcaccatggcaaacgttatacaacagcttgaagttccgacactgatt
attgctcacaataaaacactggctgcccagctttatggagaattcaaaagatttttccct
gataatgcagtggaatattttgtaagttattatgattattaccagccggaggcttatgtc
ccccagtctgatacatacatagaaaaggattcttccattaatgacaacatagataaaatg
cgccattcagccacaagaagtttactcgagcgcagagatgttataattgttgcaagcgta
tcatgtatttatggattaggttctccggaagcctattacggaatgctggtcacccttgaa
accggtgatgaccggagtatggaagaggtgttgcagaaactggtggatatacaatatgac
aggaatgattatgattttcacagaggtgtatttcgcgttaaaggtgacactattgaagtt
tttccgtcgcatgaggacagtttagcttacaggatagaatttttcggtgatgaggtggaa
aggctttctgaatttgatcctataaccggaaaaacaataaaggaaagaccgaaaattgcc
gtttatcccaatacacactacgtgacatctgctgtaagtgtggataaaattataaagcaa
atcaagtctgatcttttggagcggacagctatcctcgaaaaggaaaacaaacttgttgaa
gcccagaggcttactcagagaacaatgtacgacatagagatgattgaggaaacggggtac
tgcaacggtatcgaaaattattcgagatacttcgacgggcgcaatcctggagatactccg
ccgacactgcttagttatctgcccgaggattcacttgtgattgtagacgagtcacatatt
acgattcctcaggtcagggggatgttcaagggtgacagatccaggaagtcaacacttgtg
gaatttggtttcagactgccttcagctcttgacaacaggccgcttagatttgatgagttt
aataaaaggctggataaggttttatatgtcagtgcaacacccgctgactttgaaattact
gattccggcaatactgttgttgaacaaatcatcagacccaccggacttatggacccggca
atcgaagtcaggccggcaaaaaaccaggtggacaacttattcagcgagattaacagtatt
gttgaaaaaggcgaaagaattcttgtgacaactcttacaaaacgaatggctgaagatttg
acaagatattataaagaaatgggtttaagggttgagtatttgcattcggaaattgatact
ctggagcggataaagataatcagagagctgaggcttggaaagtttgatgtgctggtgggg
ataaatttgctgagggaagggcttgatattcctgaagtaagccttgttgcgatacttgat
gctgacaaagaaggtttcctgcgttctgacagatcccttatacagacaataggccgcgca
gcacgtaatgtaaacggcaaagctatcttttatgcagataaaatgacgaaatctatgaaa
ttcgctattgatgaaacaaacagaagaagaaaaaaacagcagttatacaacgaaaaacac
ggaataacaccggaaacgataaaaagtgagataacaaatattctggacagtatttatgag
aaagactacgtaacagttgagattgaagatgacgccgttgagagactgctgaccggtgac
aggaaaaaagacattgaagttatggaaaaagaaatgtataaagcctcagaggaacttgac
tatgaaaaagcagcgaaaatcagagatatgctttttgaatataaggcaaaaaaataa
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