Flexistipes sinusarabici: Flexsi_1475
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Entry
Flexsi_1475 CDS
T01539
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fsi
Flexistipes sinusarabici
Pathway
fsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Flexsi_1475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsi03019
]
Flexsi_1475
03016 Transfer RNA biogenesis [BR:
fsi03016
]
Flexsi_1475
Enzymes [BR:
fsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Flexsi_1475
Messenger RNA biogenesis [BR:
fsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Flexsi_1475
Transfer RNA biogenesis [BR:
fsi03016
]
Prokaryotic type
tRNA degradation factors
Flexsi_1475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AEI15125
UniProt:
F8E8C8
LinkDB
All DBs
Position
complement(1572167..1574266)
Genome browser
AA seq
699 aa
AA seq
DB search
MENKEKVYEIALGEDSEPIYLKTGWKAKQANASIWAQHGDTIVLVAATCSKDAPEGIDFF
PLTVNYFEKFYAVGKIPGGFFKREAKPSDRETLISRLIDRPLRPLFPDGFRNETQIVAMV
VSSDQVCSSDILALNAASASLMISDIPFNGPVGAVRVGRINGELILNPDAGKLDELEMNI
TVAGTEDAIVMVEAGMDIVSEDEVIDALEFGHEGIKKIIAVQKQMRDDLGKEKISFSDFS
TPEDLVVKVNSEIGDKLKKAVMIPGKQEKYDAIDEIKEEYLEKVKEELGEEDFADKSKLY
KDAFSAVEKNVFRDVTLNSGQRVDGRKYDEIRPIDIETGLLPKAHGSALFTRGETQALVT
TTLGTKMDSQMVDDIEGETSKRFMLHYNFPPYCVGEVGFMKPPGRREIGHGALAERALQY
ILPDEESFPYTMRVVSDILESNGSSSMASVCGGSLALMDAGVPVKDAVAGIAMGLIYEDG
KFAVLTDIMGLEDHLGDMDFKVTGTKEGITALQMDIKIEGLSRDILKEALQQAKEGRLYI
LDKMNEQLPSPKELPDNAPRFERINVNPEKVGLIIGPSGKTIKGIIDETGVAIDILDGGI
LNIFATDKESIENAREKIEALVQELEVNKVYTGKVKKVMEYGAFVELLPGVEALLHVSQY
SKERIKSIADYLKVGDEVKVKYQGKDERGRHKITRKDLE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaagagaaagtttatgaaatcgcgctcggggaagactccgagccgatttat
ctgaagacgggctggaaagccaaacaggccaatgccagcatttgggcgcagcatggagat
accattgtactggttgccgccacctgcagcaaggatgctcccgaggggatagatttcttc
cctttgactgtaaattattttgaaaaattttatgcggtgggtaaaatacccggaggtttt
tttaagagggaggctaagccttctgacagggaaaccttgatatcaaggttgattgaccgc
cctttaagaccactttttcccgatggtttcagaaatgaaacccaaatagtggctatggtt
gtttcaagcgaccaggtttgctcaagtgatattctggcacttaatgctgccagtgcttca
ctgatgatttccgatatcccttttaacggacctgtcggtgcagtgcgtgtgggaagaatc
aacggtgaacttattttgaatcctgacgccggaaaacttgatgagcttgaaatgaatata
actgttgccggtacggaggacgccattgtaatggtcgaagccggcatggacatagtttct
gaagatgaagtgattgatgctctggagttcggtcatgaaggaatcaaaaaaataatagct
gttcagaagcagatgagagacgatttgggtaaagaaaaaatcagtttcagtgatttttcc
actcctgaagatttagtggtaaaagttaattccgaaataggggataagctgaaaaaagct
gtaatgattcccggaaaacaggaaaaatacgatgctattgacgaaataaaagaggaatat
ctcgaaaaagtcaaagaggagctcggtgaagaggattttgcagataaatccaaactttac
aaagatgctttttctgctgtggaaaaaaatgtgttcagggatgttacactcaattccggg
cagagagttgacggcagaaaatacgatgagataagacctatcgatattgaaacaggcctt
cttccaaaagcacacggttcggctctttttacaagaggtgaaacacaggcgcttgtcacc
acaactctgggaacgaaaatggattctcagatggtggatgatattgaaggagaaacttca
aaacgttttatgcttcactataatttcccgccttactgtgtgggtgaagtcggttttatg
aaacctcccggcagaagggagataggtcatggtgcgcttgccgagcgtgctcttcagtat
attctccccgatgaggagagttttccttatacaatgcgtgttgtttcggatattcttgaa
tctaacggctcatcttcgatggcatcggtgtgtgggggaagccttgcacttatggatgcc
ggtgtgcccgttaaggatgccgttgccggaattgctatggggcttatttatgaggatggt
aaatttgccgttctgacagatataatgggattggaagatcatcttggagatatggatttt
aaagttaccggaactaaagaaggtattacagctttacaaatggatataaagatagagggt
ctttcccgtgatatattgaaagaggctttgcagcaggcaaaagagggcaggctgtacatt
ctcgataaaatgaatgagcaactcccttcaccaaaagagctgcctgataacgctccaaga
tttgaaagaatcaatgtaaatcctgagaaggtcgggcttattatcggaccttccgggaaa
acgattaaaggcattatagacgagaccggtgtagctatagatatacttgacggtggtatc
cttaatatctttgctacagacaaggaatctattgaaaatgccagagaaaagattgaagct
ctggtgcaggagcttgaagttaacaaggtttatactggtaaagttaaaaaggttatggaa
tacggcgcttttgtagaacttctgccaggtgtggaagcacttcttcatgtgtctcaatac
agtaaagaacggattaaaagtattgcagattacctgaaggtgggagatgaagttaaggtg
aaataccagggcaaagacgagcggggcagacataaaataaccagaaaagatttggaataa
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