Flexistipes sinusarabici: Flexsi_1589
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Entry
Flexsi_1589 CDS
T01539
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
fsi
Flexistipes sinusarabici
Brite
KEGG Orthology (KO) [BR:
fsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsi03400
]
Flexsi_1589
Enzymes [BR:
fsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Flexsi_1589
DNA repair and recombination proteins [BR:
fsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Flexsi_1589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
ResIII
ANAPC4
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEI15239
UniProt:
F8E937
LinkDB
All DBs
Position
1703240..1706488
Genome browser
AA seq
1082 aa
AA seq
DB search
MSDQALKDSHARKKIINDLDTNFLVEAGAGSGKTSSLVKRITSLITNGKNKISEIAAITF
TKKAASELMERLLNELEDRHNSETDPTIKENLYDAINNFDQCFTGTIHSFCSGILRERPV
EAGVDPDFDEIDDSDEFGLITEVWNEFIKSTRAENPDMLKLTEKIGVSPEELQDSFVMLN
KYPEIKIHAEKSEKPDLKPAVKKVLEICKEASKYIPDEEPDKGYDAFQKNVQSTLRLLEY
RNLYEDKYAIEILTKFEKTPKITQNRWLDKKTAKNFQDVILPDLVENTVYPVLRKHREHI
YTYFIDFFQDALTYYENKRNQESILNYNDLLTLTSKMLRNNSKVREYFQNKYKTTLVDEF
QDTDPIQAEIIMYLTGEDLKETDWSKLRPKKGSLFVVGDPKQSIYRFRRADIDIYNFVKE
IISQTGGEILELTSNFRSLNSIADYLNPVFEERFPESGDRYQAPMAKIRAIRENNYEHGV
KKILVQCDSRKKEDVVEIDAENIARYIKYAVDGGIKLARNEEEKSKGLNEKPVYSDFLII
TKHKDLLEQYANTLEKYGIPSTVTGDDFFSQSEEINHIYKLLKFLSKPDDEILLVSVLRG
MFFGLSDNDLYQFKASNGYLNIFSSIPESLDENIKNLFNNCFSTLRKYKKIINELPPSSA
LETIFQDLGILPYTSLKNLSKSRAANIYFLIEQVKQKETTEFYSFGNVVNHIGRLLESKF
EQRNSLEVESNCVRIMNLHKAKGLEAPVVFLAHPHKNTKHDPTQHINRREGEPIGYFALT
KKKGIHHKKIFAQPKNWEEFQEEEQKFLDAEFERLVYVAATRAKNLLIISCKEKGNGSQN
PWLSLLGNLKDDDVIDVPDVSIEHDSGVNELSVKDINDKKAEISHWRHSVSEENYSNMTP
TEVKDLEKIFAGERLEGGGQDWGTAVHNFLEFAVMTKDTGYEDLDTYIKFTFEELDISSD
RTEEAKKIIEDFKQTDLFNRIKNAEQVETEAPISMKINPESEIMNLFNTKTSNKPIILAG
VIDLVFKEKDGWVIIDYKTDRVNSEEEYEKLRQAYLNQVEIYAKAWEEITGEKVKEKNIY
FV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaagctctaaaggacagtcacgcaagaaagaaaataataaatgatcttgat
acaaattttttagtggaagccggtgcaggttccggtaagacttcaagccttgttaaaagg
attacgtctttaatcactaacggaaaaaataaaatctcagaaatagccgctattactttt
accaagaaggctgcttctgagcttatggaaagacttttaaatgaattggaagaccgacat
aattcagaaacagaccctaccataaaagagaacctatatgatgcgataaacaactttgac
cagtgttttaccggtacaatacactcattttgctccggcatattgagggaaagacctgtg
gaggctggagttgacccggattttgatgaaatagatgattcagacgagtttggtttgatt
actgaagtctggaacgagtttatcaagtccacaagagctgagaatcctgatatgctaaaa
ttgacggagaaaattggggtatcgcctgaagagcttcaggatagttttgttatgctgaat
aaatatccggaaatcaaaatacacgctgaaaaatctgaaaaaccggatttaaagcctgcg
gttaaaaaagtattagaaatctgtaaagaggcttcaaaatacattcctgatgaagaaccg
gataaagggtacgatgcttttcagaaaaatgtgcaatcaacgctcagacttttagaatat
agaaatctctatgaagataagtatgcaatagaaatattaacaaaatttgagaaaacaccc
aaaataacacaaaacagatggcttgataaaaaaactgcaaaaaatttccaggatgtaata
ctgccggatttggttgaaaacactgtttatccggtattaagaaaacacagggaacatatt
tatacttattttatagatttttttcaagatgcactaacatattatgaaaacaagaggaat
caggaatcaattctgaattataacgatcttctgacacttacctcaaagatgctaagaaat
aattcaaaagtaagagaatattttcaaaataaatacaagacaactctggtggatgagttc
caggataccgatcccatacaagctgaaattatcatgtatttgaccggagaagatttaaag
gaaaccgattggagtaaactgagacccaaaaaaggctcactttttgtagttggtgatcca
aaacagtcaatatacagattcagaagagctgatatagatatttataactttgtaaaagaa
attatttcacaaacaggcggtgaaatactcgaattaacttccaatttcagatcattaaac
agcatagctgattatctcaatcctgtttttgaagaaaggtttcctgagagtggtgacagg
tatcaggcacctatggcaaagatccgtgcaatccgtgaaaacaattatgaacacggtgta
aaaaagatattagtccaatgtgactccagaaaaaaagaagatgttgttgaaattgacgct
gaaaatatagcaagatatataaaatatgctgtagacggtggaataaaattagcccgaaat
gaggaagaaaaatctaaaggacttaatgagaagcctgtatattcagattttttgataata
accaaacataaagatttgctggaacaatatgcaaacacactggaaaaatacggaattcct
tcaactgtaaccggtgatgattttttcagccagtcagaagagataaaccatatttataag
ctccttaaatttctcagtaaaccggatgatgagatactcttagtatcagtactaagaggt
atgtttttcggtttgagtgataatgacttgtaccagtttaaagcatcaaatgggtatctc
aatatctttagcagtataccggaatcgctggatgaaaacatcaaaaatctttttaataac
tgtttttcaacacttcgcaaatataaaaagattatcaatgagttgccaccatcgtcagct
ttggaaacaatctttcaggacttagggattttaccctatacatcactgaagaacttatca
aaaagccgggctgcaaacatttattttttaatagaacaagtcaaacagaaggaaactacc
gaattttactcatttggaaatgtagtcaaccatataggcagattgttagagtcaaaattt
gaacagagaaacagcctcgaagttgaaagcaattgcgtgagaataatgaatttgcataaa
gcaaaaggtttggaagcacctgttgtttttcttgcccaccctcacaaaaatactaaacac
gacccaactcagcatattaacagacgagagggcgaacctataggttattttgcactaact
aaaaagaaagggatacaccataaaaaaatttttgctcaacctaaaaattgggaagaattc
caggaagaggaacaaaaatttttagatgctgaatttgaaagacttgtctatgtggcagca
acgagggctaaaaatctccttataataagctgtaaagaaaaaggcaatgggagtcagaac
ccctggctgagcctgctgggtaatttaaaagatgacgatgtaatagatgtacctgatgtc
agtatagagcatgattcaggtgtaaatgaattatccgtaaaagatataaatgataaaaaa
gctgagatcagtcattggaggcattctgtgtcagaagagaattattcaaacatgaccccc
acagaagtaaaagatttggaaaaaatatttgccggtgaaaggctcgaaggcggcggtcag
gactggggtaccgctgtgcataattttttagagtttgctgtaatgaccaaagataccgga
tatgaggatttggatacttatataaaatttacttttgaagagctggatataagctctgac
agaacagaggaagctaaaaaaataatagaagattttaaacaaacagacttatttaaccga
ataaaaaatgccgaacaagtggagacggaagcccccatttctatgaaaattaatccggaa
tccgaaatcatgaatttgtttaatactaaaacgagtaacaagcctataatcctggcaggc
gtaattgaccttgtgtttaaagaaaaggacggctgggtaattatagattacaaaaccgac
agagttaattccgaagaagaatatgaaaaactcaggcaggcctatttaaatcaagtggaa
atttatgcaaaagcatgggaagagataaccggtgaaaaagtaaaagagaaaaatatatac
tttgtatga
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