Flexistipes sinusarabici: Flexsi_2222
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Entry
Flexsi_2222 CDS
T01539
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
fsi
Flexistipes sinusarabici
Pathway
fsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Flexsi_2222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsi03400
]
Flexsi_2222
Enzymes [BR:
fsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Flexsi_2222
DNA repair and recombination proteins [BR:
fsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Flexsi_2222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF2654
Motif
Other DBs
NCBI-ProteinID:
AEI15843
UniProt:
F8E602
LinkDB
All DBs
Position
2380504..2383728
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AA seq
1074 aa
AA seq
DB search
MSLNVYYGVQLENVFDLFAYSLEKNRSVDPLESEFVVVQTEGMKKWLSLMLAQRFSVCSN
IKFFTPNGIINHLAGRITGEQIKADKKKLAWVIYSTLPLHFENRYFDEIKRYTAFDRSGV
KQYQLSEKIADIFDQYQVYRPWMLQSWEKGEYVNQNGEKLPEDYWWQPILWQNLCKRDEI
NRSDVYLRMLNTTGAAGAKDENKHIFVFGISVLPPLYVKILENLGYRFEIEMFLQSPSRE
YFGTERFYKNADREELKEGVNSLVANLARTGSEFFDFLAEYIDYFSSDMKPKKEESLLQC
VQNDIISLKPPGKIIDTHKTEDESIIVNSCHSPMREVQVLYDYLLRFFDEDSNLTPSDIV
VMTPDIEEYAPYINAVFGSAAFDDVSIPYSISDKTLSGIYSSVQLFTSFLQISSGRLKFS
DIFQFLEKEIVYTKFGLTPPDVEMLKSLCKSSVMKWGWDSDIAESFNLPYYEYFTVSKGI
DRLLLGSAVLAYEWSSFDDIVPSVSVEGENFEILGRFVKYVYTVKRYRDILGKNYSAEEW
LDILNNLQQDLFSGTADNDGLQEINNGIRAFGTYTAGIISEELPAYVVAEFFKSYFKSVE
KTGGYMEGGITFCSMIPMRSIPFKIICMIGMNDTSFPRIHKPVEFDLTAVYPAKGDRSTK
DNDRYLFLETIMSARKKLYISYTGQSIKDNSDIPPSPVVAGLLEYVRQISGGGYSLINKH
KLHPFSITYFDEKEKMFSYSKTNFQIAESYLETPVTDEDRGEDILTEDAKPPSEIDIEEI
AYFFKNPLRYYFKNNLGIYPENLAQDNEDVEPLNLNNLQKTILKDRLAKESLFSEEQEIS
LDEMLNYYRKSGLFPPGKFGEYMKEVNKYNVSFFTNNIKKTLKPPEIKAMDFYLDVKNRN
INIRGEYMLSGSVNILARMAKIKDSDRIKAWLYHIFALYDLLQSNRYSGEFSTLFYSEDK
ILKFEDYTDLYKNDEKMYENLHSYVRFIVETYIYGSVNPLPLFPVFGCSYAKKIIKGESA
DFGRSWWAQNVYKNDDKFYLEKLYGDVIPGTENLKELSRIIYLPMLQKESFVGT
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttaacgtttattacggtgttcagcttgaaaacgtctttgacctttttgcttat
tctctggagaaaaacagaagcgtagatcctttggaatccgaatttgtcgttgttcagaca
gaaggtatgaaaaagtggctttctcttatgcttgcccagcgtttttccgtatgctcaaat
attaaatttttcacacccaacggtataatcaatcacctcgccggcagaataacgggagaa
caaattaaagcggataaaaagaaacttgcctgggtaatttattctactctacccttacat
tttgaaaacagatattttgatgaaattaaaagatacacagcatttgaccgatcgggagtg
aaacagtatcagctcagtgaaaagattgcagatattttcgaccaatatcaggtatacagg
ccgtggatgcttcaaagctgggaaaaaggagaatatgtcaatcaaaatggtgaaaaactc
cctgaggattactggtggcagccgattttatggcagaatctctgtaaacgagacgagatt
aacagaagtgatgtttatctgcggatgcttaatactaccggagcggctggggcaaaagat
gaaaataaacatatttttgtttttggaatatctgtacttccgccactttatgttaaaatt
ttagaaaacttaggctatcgttttgaaatcgaaatgtttctgcagtcccccagcagagag
tatttcggaacagaaagattttacaaaaatgcagatcgggaagagttgaaagagggtgta
aattcacttgtggcaaacctcgccaggacgggaagcgagttttttgatttccttgctgag
tatatcgattatttttcctctgatatgaaaccgaaaaaagaggaatcactactacaatgt
gttcaaaatgatattatatcgttaaaacctcctggaaaaattatagacacacataaaact
gaagatgaaagtatcattgtaaactcctgccacagcccgatgagggaagtccaggtttta
tacgattatcttttgagattttttgatgaagactcaaatcttacgccgtctgatattgtt
gtaatgactcctgatattgaggaatatgcaccttatataaatgcggtatttggctccgca
gctttcgacgatgtgagtatcccatattccataagtgataaaacactttcggggatatat
tcatccgttcagttgttcacttcatttttacagatatcttcagggagattaaagttttcc
gatattttccagttccttgaaaaggagattgtttacaccaaattcggccttactccaccg
gatgtggagatgttaaagagcttgtgtaaatcctcggtaatgaaatggggttgggacagc
gatatagcagaatctttcaatcttccctattatgaatattttactgtttccaaagggata
gaccgtcttttgctcggttccgcagtacttgcctacgagtggagcagctttgatgatatt
gttcccagtgtatctgtggagggggagaattttgaaattctcggcagatttgtaaaatat
gtttatactgtaaaaagataccgggatatactggggaaaaattattccgccgaagagtgg
cttgacatattaaataatcttcagcaggacctattttccggaaccgctgataatgacggt
ctgcaggagataaataatgggataagggcattcggtacttatacagcaggaattatcagt
gaagaattaccggcgtatgttgttgcggaattttttaaatcttatttcaaaagtgttgag
aaaaccggcggttatatggagggaggtattacgttctgctccatgattccaatgagaagc
atcccatttaaaattatctgtatgataggtatgaatgatacttctttcccgcgcattcat
aaacctgtggaatttgacctgaccgccgtatatcctgcaaaaggtgacagatcaaccaag
gataatgacaggtatctttttcttgaaacgataatgtcagccagaaaaaaactatatata
agctataccggtcaaagtataaaagataattccgatatccccccttctcccgtagttgcc
ggactgctggagtatgtaaggcaaatatccggtggcggatactctctgattaataaacat
aaacttcaccccttcagcattacctattttgatgaaaaagaaaaaatgttcagctattcg
aaaaccaattttcaaatagccgaatcctatttagaaacacctgttacggatgaagatcgg
ggggaagatatattaacagaagatgccaaaccgccgtcggaaatagatatcgaggagata
gcatattttttcaaaaaccctctaaggtattatttcaaaaataatctcggcatctatcct
gaaaacctggcacaggataatgaggatgtggagcctttgaatctgaacaatttacaaaaa
accatattgaaagacaggctagcaaaggaatccctcttttcagaggaacaggaaatttct
ttggatgagatgctgaattattatcggaagagcggattattcccccccggaaaattcggt
gaatatatgaaggaagtaaataaatataatgtttcctttttcacaaataatataaagaaa
acgttaaaaccgcctgaaataaaagcaatggatttttaccttgatgtaaaaaacaggaat
attaacatcaggggtgagtatatgctttccggctctgtaaatatacttgcccgaatggcg
aaaataaaagattccgacagaataaaggcatggctgtatcatattttcgcactttatgat
ttattacagagtaaccggtacagtggagaatttagtacactcttttactctgaggataaa
atacttaaatttgaagactatacggatttatacaaaaatgatgaaaagatgtatgaaaac
ctgcatagttatgttaggtttattgtcgaaacgtatatttacggctcagtgaatcccctg
cctctttttcccgtatttggctgcagttatgcaaagaaaattataaaaggtgaatcggcc
gatttcggacgctcctggtgggcgcaaaacgtctataagaacgatgataagttttatttg
gaaaagctgtacggcgatgttatcccgggaacggaaaacttaaaggaactttcccgaata
atctatctgcctatgctgcaaaaggagtcgttcgttgggacataa
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