Flexistipes sinusarabici: Flexsi_2328
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Entry
Flexsi_2328 CDS
T01539
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fsi
Flexistipes sinusarabici
Pathway
fsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Flexsi_2328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsi03019
]
Flexsi_2328
03110 Chaperones and folding catalysts [BR:
fsi03110
]
Flexsi_2328
03029 Mitochondrial biogenesis [BR:
fsi03029
]
Flexsi_2328
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fsi04147
]
Flexsi_2328
Enzymes [BR:
fsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Flexsi_2328
Messenger RNA biogenesis [BR:
fsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Flexsi_2328
Chaperones and folding catalysts [BR:
fsi03110
]
Heat shock proteins
HSP60 / Chaperonin
Flexsi_2328
Mitochondrial biogenesis [BR:
fsi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Flexsi_2328
Exosome [BR:
fsi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Flexsi_2328
Exosomal proteins of other body fluids (saliva and urine)
Flexsi_2328
Exosomal proteins of breast cancer cells
Flexsi_2328
Exosomal proteins of colorectal cancer cells
Flexsi_2328
Exosomal proteins of bladder cancer cells
Flexsi_2328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEI15940
UniProt:
F8E6Q0
LinkDB
All DBs
Position
complement(2502247..2503896)
Genome browser
AA seq
549 aa
AA seq
DB search
MAKAITFSEEARQAILKGVDKLANAVKVTLGPKGRNVLIEKKFGSPTVTKDGVTVAKEIE
LEDSLENLGAQMVKEVASKTSDIAGDGTTTATVMAQALYKEGIKNVVAGANPMELKRGAE
KAVEKVVEKLSGISKTISDKKEIAQVGTISANNDSEIGGIIADAMDRVGKDGVITIEENK
STETVLEVVEGMQFDRGYLSPYFVTDTESMEASFENAYILIYDKKISNMKDVLPVLEQVA
KQNAPFVIVAEDIEGEALATLVVNKLRGTLNCAAVKAPGFGDRRKEMLKDLAVLTGGQVI
SEDVGLKLESAQLSDLGKAKKITIDKENTTVVEGEGKTEDIQARVNQIKKQIEDSTSDYD
KEKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDALNATKAAVEEGIVAGGGVALVR
AMKVLDELKLEGDEQIGADLIKKSLEFPLRQIVENAGYEGSIVVNKIKEAKDDNYGFNAA
TETYMDLIEAGVIDPTKVTRSALQNAASVATLMLTTEATITEVPEKDDKSGGAPDMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaataacatttagcgaagaagcaagacaagctattttaaaaggtgtagat
aaacttgcaaatgcagtaaaagtaacattgggtcccaaagggagaaatgtattaattgaa
aaaaaattcggttctccgacagtaacaaaggacggagttactgttgccaaagaaattgag
ctggaagattctttggagaaccttggagcccagatggttaaagaagtggcttccaagaca
agtgatatagcaggtgacggtacaacaactgctacagtcatggcacaggcactgtataaa
gaaggtatcaaaaatgtagttgccggtgctaatccgatggaacttaaaagaggagctgag
aaagcggttgaaaaagttgtggaaaagctgtcaggaatatccaagacgatttctgataaa
aaggaaatcgcccaggttggtacaatctccgcaaacaatgactcagaaattggcggaatt
attgcagacgctatggacagagtgggcaaagacggtgttatcacaatagaagaaaataaa
tccactgaaacagtactggaagttgttgaagggatgcagtttgaccgcggttatctttcc
ccctattttgtaactgacacagaaagcatggaagcttcctttgaaaacgcatatatactt
atttatgataaaaaaatctcaaacatgaaagatgttctccctgtgcttgaacaggttgca
aagcaaaacgctccgtttgtaatagtagccgaagatattgaaggggaggcgcttgccaca
cttgttgttaataaactcagaggtacattgaactgtgcggcagttaaagctcccggtttt
ggcgacagaagaaaagagatgcttaaagacctggctgtgttaaccggtgggcaggtgatc
agtgaagatgttggtcttaaacttgaaagcgctcagttaagcgatcttggtaaggctaag
aaaattaccattgataaagaaaacacaactgtcgtagaaggcgaaggtaaaactgaggat
atccaggcaagggttaatcagattaaaaaacagattgaagattcaacaagtgattacgat
aaagaaaaacttcaggagagacttgccaagcttgtcggcggtgttgctgtaatcaaggtt
ggagctgctactgaaacagaaatgaaagagaaaaaggcaagagttgaagacgctctgaat
gctacaaaagcagccgttgaggaaggcattgttgccggcggcggtgttgcactcgtaaga
gcaatgaaggttcttgatgagttgaagctggaaggcgacgagcagatcggtgccgatctt
ataaagaaatcgctggagttccctctcagacaaattgttgagaatgccggatacgaaggg
tctatagttgttaacaaaatcaaggaagcaaaagatgataattatggatttaacgcagca
acagaaacttatatggacttaattgaagccggtgttattgatcctaccaaagttacacgc
agtgctcttcaaaatgcggcatccgttgcgactctcatgttgacaacagaagctacaatt
acagaagttcctgaaaaggacgataagtccggcggtgcacccgatatgggcggcatgggc
ggaatgggaggcatgggcggaatgatgtaa
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