Flaviflexus salsibiostraticola: EJO69_00265
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Entry
EJO69_00265 CDS
T05752
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fsl
Flaviflexus salsibiostraticola
Brite
KEGG Orthology (KO) [BR:
fsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsl03016
]
EJO69_00265 (truB)
Enzymes [BR:
fsl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EJO69_00265 (truB)
Transfer RNA biogenesis [BR:
fsl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EJO69_00265 (truB)
Prokaryotic type
EJO69_00265 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AZN28904
UniProt:
A0A3S8Z627
LinkDB
All DBs
Position
51441..52358
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AA seq
305 aa
AA seq
DB search
MIDVPRGMFPAESGIIVIDKPAAVTSHDVVAAVRRLAQTKKVGHAGTLDPAATGVLVLGI
GAGTKLLTYLSGADKDYESTFRLGQETATEDAEGEILSTPGIEASDEEIDAALVSLTGQI
SQVPSAYSAKKIDGRRACDLARAGETVELKAVDVTIDRLVRTSPIVRTDGLADFDVAVTC
SSGTYIRALARQTGQALGSIGHITALRRTRVGGFHEAEARSLDELADVVLSEPLPVIPMV
EAARRAMATVDITAEQEQALRFGQFIDIEASAYPVALIRGDVLVAIGRRRGNQVGPAVVF
AAPSA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgttcctcgcgggatgttccccgccgagtcggggatcatcgtcatcgacaag
cccgccgccgtcacatcccacgatgtggtggcggcggtccgtcgtctcgcccagacgaag
aaggtcgggcacgccggaactctcgaccctgcggcaaccggagtcctcgtcctcggcatc
ggggcgggcacgaagctcctcacctacctctcgggggccgacaaggactacgagtcgacc
ttccgtctcggccaggagacggcaaccgaggacgccgagggtgagatcctctcgaccccc
ggtatcgaggcgagcgatgaggagatcgacgccgcgcttgtatcgctgacggggcagatc
tctcaggtgccctctgcctattcggcgaagaagatcgatggcaggcgtgcctgcgacctg
gctcgggcaggggagacggtcgagctcaaggccgtcgacgtgacgatcgatcgactggtc
cgcacgtcccccatcgtccgcaccgacggactggccgacttcgatgtcgccgtcacctgc
tcgtccggcacctacatccgcgccctcgcccgccagacggggcaggcgctcggatccatc
ggccacatcaccgccctgcgccgcacccgggtgggcggcttccacgaggcggaggcccgc
tcgctcgatgagctcgccgacgtcgtcctcagcgagccgctgcccgtcatccccatggtc
gaggctgcgcggcgcgcgatggcaaccgtcgacatcacggcagagcaggagcaggcgctc
cgattcgggcagttcatcgacatcgaggcatccgcgtacccggttgcactcatccgcggc
gacgtgctcgtcgccatcggccggaggcgcggcaaccaggtcggccctgccgtcgtattc
gctgcccccagcgcctga
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