Flaviflexus salsibiostraticola: EJO69_01815
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Entry
EJO69_01815 CDS
T05752
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
fsl
Flaviflexus salsibiostraticola
Brite
KEGG Orthology (KO) [BR:
fsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsl03016
]
EJO69_01815
Enzymes [BR:
fsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EJO69_01815
Transfer RNA biogenesis [BR:
fsl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EJO69_01815
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AZN29175
UniProt:
A0A3S8Z6R8
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All DBs
Position
complement(380764..381882)
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AA seq
372 aa
AA seq
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MSAAVDSLKKGSGPFAIDTERAQGIRYSNRAYLIQIKREGSGLFLIDPPPLEDHMSGLAE
VLAEDEWILHAADQDLPSLRREGLNPPSLWDTEVAALLLGDERVSLQAAISDNLDIQLAK
EHSNSDWSTRPLAPELLSYAALDVELLIELRGVQHRRLEEAGRLEWMMQECEHLRTSPPN
PPNPEPWRKIGTSLRIRDPRTLAILRELWLERDEIARTRDVGPEKVLPGKALGALAASLP
GTLDEVRASSALRSRSRQDLSTRWWAAIERGWDTDNLPSRHAPSKDGLPDVRNWKNRRPE
AAERWDIVRPTVLKRAEDLGIRQDALLKPAIQRQLAWEGWDSITSMVDVLYRAGARPWQI
EEVAVVLPRSPK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcagtcgactccctcaagaagggcagcgggcccttcgccatcgacaccgaa
cgcgcccagggtatccgctactccaatcgcgcctacctcatccagatcaagcgggagggc
tcagggctcttcctcatcgatcctcccccgctcgaggaccatatgtccggactcgccgag
gtgctcgccgaggatgaatggatcctccacgctgcggatcaggatctgcccagcctgcgc
cgcgagggcctcaacccgccgtccctgtgggacaccgaggtggctgcgctgctgctcggc
gacgagcgggtctcccttcaggccgcgatctcggacaatctcgacatccagctggcgaag
gagcattccaactccgattggtccactcgcccgcttgccccggagctcctgtcgtacgcc
gccctcgacgtcgagctcctcatcgagctccgcggggtccagcaccgacgcctcgaggag
gcgggtcggctcgagtggatgatgcaggagtgcgaacacctgcgcaccagccctccgaat
ccgccgaaccccgaaccgtggcgcaagatcggcacctcactgaggatccgcgacccccgt
actctcgcgattcttcgcgagctttggctcgaacgcgatgagatcgcccgcacccgcgac
gtcggaccggagaaggtccttcccggcaaggcgctcggcgccctcgcggcgtcgctgccc
ggcaccctcgacgaggtgcgggcctcctcggccctgcgctcgcgctcccgtcaggacctg
tcgacccgctggtgggctgcgatcgagcgcggctgggacaccgacaacctgccctcccgc
catgctccgtcgaaggacggcctgccggacgtgaggaactggaagaaccgcaggcccgag
gccgcggagcgctgggacatcgttcgacccactgtcctgaagcgggcagaggatctcgga
atccgacaggatgccctcctcaagcccgcaatccagcgccagctggcgtgggagggatgg
gattcgatcacgtcgatggtcgatgttctctaccgtgcgggcgccaggccgtggcagatc
gaagaggtggccgtcgtcctaccgcggtcgcccaagtag
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