Flaviflexus salsibiostraticola: EJO69_04080
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Entry
EJO69_04080 CDS
T05752
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fsl
Flaviflexus salsibiostraticola
Pathway
fsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EJO69_04080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsl03400
]
EJO69_04080
Enzymes [BR:
fsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EJO69_04080
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EJO69_04080
DNA repair and recombination proteins [BR:
fsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EJO69_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AZN29575
UniProt:
A0A3Q8WUQ9
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All DBs
Position
complement(859164..860063)
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AA seq
299 aa
AA seq
DB search
MPELPEVETVREGLERLLKGERIDDIAVYHPRAVQRSEGDVAGLAVFGGRTVEAVVRRGK
FLWFEMEGIALNFHLGMSGQLLVSEPGAPAPDHPHLRARIMFKDGSVLRFLDQRTFGYLQ
RSSLTEVSDGRPAGQGTESPFIPVPVAHIARDVLDPWVEVGDIARRTRRRRTEIKRAMLD
QTLASGMGNIYCDEALYRAKINPRRKTNGLSYQRIEALWHHSKDVLREALEQGGTTFDAL
YVNVNGASGYFSRSLQAYGQGGKPCGRCGATMTRIQFMNRSSTFCPICQPFSGGSSSRL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaggtcgagaccgttcgcgagggtctcgagaggctgctgaagggt
gagaggatcgatgacatcgcggtctatcacccgcgtgccgtccagcgctccgaaggcgac
gtcgccggacttgccgtcttcggcggccgcaccgtcgaggcggtggtccgccgcggaaag
ttcctctggttcgagatggaggggatcgccctcaactttcacctcggcatgtcgggacag
cttctggtgagtgagccgggtgccccggcccccgaccacccgcacctgcgcgcccgcatc
atgttcaaggacggcagcgtcctgcgcttcctcgaccagcgcaccttcggctacctgcag
cgctcctccctcaccgaggtctccgacggccgtccagcgggtcagggtactgagtccccc
ttcatcccggtgccggtcgcccacattgcgcgagatgtccttgatccatgggtcgaggtc
ggtgacatcgcgcggcggacgaggaggaggcgcaccgagatcaaacgggccatgcttgat
caaacgctcgcctccggcatgggcaacatctactgtgatgaggcgctctaccgggcgaag
atcaaccccagacgaaagaccaacgggctgtcctaccagcgtatcgaggcgctctggcat
cactcgaaggacgttctccgggaggcgctcgaacagggcggcacgacgttcgatgcgctc
tacgtcaacgtcaacggcgcatccggctacttctcccgatccctccaggcctatgggcag
ggcggcaagccgtgtggcaggtgcggggcgacaatgacgcgtatccagttcatgaatcgg
tcgtcgacgttctgcccgatctgccagccattcagtggtggatcctcgtcgcgattgtga
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