Flaviflexus salsibiostraticola: EJO69_09945
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Entry
EJO69_09945 CDS
T05752
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fsl
Flaviflexus salsibiostraticola
Brite
KEGG Orthology (KO) [BR:
fsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsl03032
]
EJO69_09945
03400 DNA repair and recombination proteins [BR:
fsl03400
]
EJO69_09945
Enzymes [BR:
fsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EJO69_09945
DNA replication proteins [BR:
fsl03032
]
Prokaryotic type
DNA Topoisomerases
EJO69_09945
DNA repair and recombination proteins [BR:
fsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EJO69_09945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AZN30583
UniProt:
A0A3Q8WV17
LinkDB
All DBs
Position
2138641..2139612
Genome browser
AA seq
323 aa
AA seq
DB search
MEKLVRVEPGRGGITRRRAGRGFTYLSANGRRVRSERILSRIEALVIPPAWTDVWIASQP
NGHIQATGVDEAGRRQYLYHPKWREMRDSEKFTRSLSFAQSLPSIRRAVTRDLKQTSDGR
TRALAAAVRLIDRAGLRVGGQEYADENGSFGASTLQRRHVTIEDDTVHLRFKGKSAGDWD
VVLDDDLLLAFFEEIPKSPRGAPAICYAVTSGRRKEWKGVSAGDINNYIGDLAGPHFTAK
DFRTWQGTVIAARSLAQAFRRGLTAPEAQRAAIKEAAERLHNTPAVARDSYINPRVVELF
EKGRVADLKRQSDQAVVRLLMSG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcttgttcgagtcgagccgggtcgcggcggcatcacccgccgccgcgcgggg
aggggattcacctacctgtccgcgaacggccggagggtgaggtccgagcggatcctctcc
cgaatcgaagcgctcgtcattccgccagcgtggacggacgtgtggatcgcctcccagccg
aacggccacatccaggcaacgggggtcgatgaggcgggtaggaggcagtacctctaccac
ccgaagtggcgggagatgagggacagcgagaagttcacgcgctcgctctcgttcgcgcag
agcctcccctcgatccgcagggcagtgacccgcgacctcaagcagacgtccgacggccgg
acgagggcgctcgcggccgccgtccgcctcatcgatcgggcgggccttcgagtgggcggc
caggagtacgccgatgagaatggatccttcggcgcatcaacgctccagcgccggcacgtg
accatcgaggacgacacggtccacctgcggttcaagggcaagtcggctggcgattgggat
gtcgtcctcgacgatgatctgctcctggcgttcttcgaggagataccgaagagccctcgc
ggcgcgccggcgatctgttacgcggtgacgtccgggcgccgcaaggaatggaagggtgtc
tcggcgggggacatcaacaactacatcggtgacctggcggggccgcacttcaccgccaag
gactttcgaacgtggcagggaaccgtcatcgccgcgcgatcgctcgcgcaggcgttccgc
cggggcctcaccgcgcccgaggcgcagcgcgccgcgatcaaggaggcggctgagaggctg
cacaacaccccggcggtcgctcgggattcctacatcaatccgcgggtcgttgaactcttt
gagaagggtcgagtcgccgacctcaagcggcagtcggatcaggcggtggtccggctgctc
atgagtgggtga
DBGET
integrated database retrieval system
