Flaviflexus salsibiostraticola: EJO69_11890
Help
Entry
EJO69_11890 CDS
T05752
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fsl
Flaviflexus salsibiostraticola
Pathway
fsl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EJO69_11890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsl03021
]
EJO69_11890
03400 DNA repair and recombination proteins [BR:
fsl03400
]
EJO69_11890
Enzymes [BR:
fsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EJO69_11890
Transcription machinery [BR:
fsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EJO69_11890
DNA repair and recombination proteins [BR:
fsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EJO69_11890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AZN30926
UniProt:
A0A3S8ZBS7
LinkDB
All DBs
Position
2542807..2546697
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNLFDELHISLATAQDVHSWSHGEVKKPETINYRTLKAEKDGLFCERIFGPTRDWEC
ACGKYKRPRYKGIECERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMVTDVDEEGRSEAMPELRGEVDLELKEIENQLNVDIENVAQQTERE
LEEAEASGATAKERKAIQEAGEKEQARIRKSAEVERDHLEEVWDRFMKLKVGDLEGDEDV
YREMYGRWGMYFEASRGAEAIQARLRSFDLDAEAEILQETIKTGTAQRKTRALKRLRVVN
AFRTTGTKPESMVLDVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
DAPEIMVNNEKRMLQEAVDALFDNGRRGRPVQGAGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPTLKLHQCGLPKAMALELFKPFVQKRLVDQQVAKNIKAAKRLIERQR
SEVWDILEEVITDHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSANNILKPSDGRPVTMPSQDMIIGIFHLTSENEVTGEDRR
RFSSVGEAIMSFDTGEIGLNDTVLIRFPKLVPPRGWVAPEGWSDEDPIILETTLGRALFN
DALPVQFPYVNETVDKKRLGAIVNELAERYPKVDVGASLDALKETGFYWAGRSGVSISLA
DIQVPESKAGILEEAEEQAAKIEELFENGMIEDADRRRDLSDLWTEVTEHVAQEMRNNFT
DDNSVNRMVTSGARGNWTQVRQLAGMRGLVANPKGEIISRPIKSNYFEGLSVLEYFSATH
GARKGTADTALRTADSGYLTRRLVDVAQDVIIREHDCGVAKGLTNRIAYVDETGVRRLDP
AVPTSVYARTLAADVTDADGSVIVAAGTDLGDVEIERLFQAGLDEVMVRSVLTCNSRSGA
CAMCYGRSLATGLLVDIGEAIGIVSAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQ
ELFEARTPKGEAPITEAAGIVSVEDGERSRQLVIKRDDGGDDLSYQVSRSVKLLVEDGQH
VAVGEQLTEGSVDPKKVLRISTRRRAQLYLVEQVQAVYRSQGVEIHDKHIEVIVRQMLRR
VTVIESGDTSLLPGELADVKDYESANREAVARGGKPATARPELMGITKASLATDSWLSAA
SFQETTKVLTEAALNAKRDPLNGLKENVILGKLIPAGTGLEKLRTAAAEPTTEARLEFEK
MTGFIRQDLDPYDGLDFGSGLYGTGYSGYGPAFTGN
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaatctgtttgatgaactccatatctcgctggcgaccgcacaggatgtg
cactcgtggtcgcacggcgaggtcaagaagcctgaaacaatcaactaccgcacgctgaag
gccgagaaggacggtctcttctgcgagcgcatcttcggccccacgcgggactgggagtgc
gcgtgcggcaagtacaagcgtccccgctacaagggaatcgaatgcgagcgctgcggtgtg
gaggtcacccgcgcgaaggtccgccgtgagcggatgggccacatcgagctcgcggctccc
gtcacccacatctggtacttcaagggcgtcccctcgcgcctgggctacctgctcgacatt
gcaccgaaggacctcgagaaggtcatctacttcgccgcctacatggtgacggatgtcgat
gaggagggccgttcggaggccatgcccgagctgcgcggcgaggtggatctcgagctcaag
gagatcgagaaccagctcaacgtcgacatcgagaatgttgcccagcagaccgagcgtgag
ctcgaggaggccgaggcatccggtgcgaccgccaaggagcggaaggccatccaggaggcg
ggcgagaaggagcaggcccgcatccgcaagtccgccgaggtcgagcgcgatcacctcgaa
gaggtgtgggatcgcttcatgaagctcaaggtcggcgaccttgagggcgatgaggatgtg
taccgcgagatgtacggccgctggggcatgtacttcgaggcgtcgcgcggcgccgaggcc
atccaggcccgcctgcgcagcttcgatctcgatgccgaggccgagatcctccaggagacg
atcaagaccggcaccgcacagcgcaagacccgcgccctcaagaggctcagggtcgtcaac
gcgttccgcaccaccggcacgaagccggagtcgatggtcctcgacgttctcccggtcatc
ccgccggacctgcgtccgatggtccagctcgatgggggccgtttcgcgacctcggatctc
aacgatctgtaccgccgcgtcattaaccgcaacaaccgcctcaagcgcatgatcgacctc
gatgcgcccgagatcatggtgaacaacgagaagcgcatgctgcaggaggccgtcgacgca
ctgttcgacaacggccgccgcggtcgtcccgtccagggcgccggcaaccgtccgctcaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgtcagaacctcctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgacgctcaagctgcaccag
tgcggcctgccgaaggcgatggcgctcgagctgttcaagccgttcgtccagaagcgtctc
gtcgaccagcaggtcgcgaagaacatcaaggcggccaagcgactcatcgagcgtcagcgc
tccgaggtgtgggacatcctcgaagaggtcatcaccgaccacccggtcctcctcaaccgc
gcacccacgctgcaccgcctcggtattcaggcgttcgagccgcagctcgtcgagggtaag
gccatccagctgcacccgctcgtctgtgcggcgttcaacgccgacttcgacggcgaccag
atggctgtccacctgccgctgtccgcagaggcgcaggccgaggcccgcattctcatgctg
tcggccaacaacatcctcaagccgtcggacggtcgcccggtcaccatgccctcgcaggac
atgatcatcggcatcttccacctgacgagcgagaacgaggtcacgggcgaggatcgccgc
aggttctcctcggtcggcgaggcgatcatgtcgttcgacaccggcgagatcggtctcaat
gacacggtcctcatccgcttcccgaagctcgtgcccccgcgcggctgggtcgcccccgag
ggctggtcggatgaggatccgatcatcctcgagacgacgctcggacgggcgctcttcaac
gacgcgctgccggtccagttcccctacgtcaacgagacggttgacaagaagcgcctcggt
gccattgtcaacgagctcgctgagcgctacccgaaggtcgacgtcggcgcctcgctcgac
gcgctgaaggagaccggcttctactgggcgggccgctccggcgtctcgatctccctcgca
gatatccaggttcccgagtcgaaggccgggatcctcgaagaggcggaggagcaggcggcg
aagatcgaggagctgttcgagaacggcatgatcgaggacgccgaccggcgccgcgacctc
tcggacctgtggaccgaggtgaccgagcacgtcgcacaggagatgaggaacaacttcacc
gacgacaactcggtcaaccggatggtcacctcgggcgcccgcggcaactggactcaggtc
cgtcagctcgccggcatgcgaggcctggtcgccaacccgaagggcgagatcatctcccgc
ccgatcaagtcgaactatttcgagggcctgtccgtcctcgagtacttctcggccacccac
ggcgcccgtaagggaaccgccgatacggcactgcgcaccgccgactcgggctacctcacc
cgtcgcctggtcgacgtcgcgcaggatgtcatcatccgcgagcacgactgcggtgtggca
aagggcctgacgaaccgcattgcctacgtcgacgagaccggcgtgcgccgcctcgacccg
gcggtgccgacctcggtctacgcacggacactcgcggccgatgtgacggatgcggatggc
agcgtcatcgttgcagccggcaccgacctcggcgatgtcgagatcgagcggctgttccag
gccggcctcgatgaggtcatggtccgttcggtcctcacgtgcaactcccgctccggcgcc
tgcgccatgtgctacggacgttcgctcgcgaccggcctgcttgtcgacattggcgaggcg
atcggcatcgtctccgcccagtcgatcggcgagcccggcacgcagctgacgatgcggacg
ttccacacgggcggtgtggcgtcggcagacgacatcacgcagggtcttccccgtgtccag
gagctgttcgaggcccgcacaccgaagggtgaggccccgatcacggaagccgcaggcatc
gtctcggtcgaggacggcgaacgttcgcgtcagctcgtcatcaagcgcgacgacggcggc
gacgacctgtcctaccaggtgtcccgctcggtcaagctcctcgtcgaggacggccagcac
gttgcggtgggcgagcagctgacggagggttcggtggacccgaagaaggtcctccgcatc
tcgacccgtcgccgcgcgcagctctacctcgtcgagcaggtccaggccgtgtaccgctcg
cagggcgtcgagatccacgacaagcacatcgaggtcatcgtccgccagatgctgcgccgc
gtgacggtcatcgagtccggcgacacgagcctgctgccgggtgagctggccgacgtcaag
gactacgagtccgcgaaccgcgaggcggtggcccgcggcggcaagccggcaacggcccgc
cccgagctcatgggcatcacgaaggcgtcgctcgcgaccgactcgtggctgtccgccgcc
tccttccaggagacgacgaaggtcctcaccgaggccgcactcaacgcgaagcgcgacccg
ctgaacggcctcaaggagaacgtcatcctcggcaagctcatcccggccggcaccggcctg
gagaagctgcgcaccgccgccgcggagccgacgaccgaggcgcgcctcgagttcgagaag
atgacgggcttcatccgccaggatctcgatccgtacgacgggctcgacttcgggtccggc
ctctacgggaccggctactcgggctacggcccggcgttcaccgggaactga
DBGET
integrated database retrieval system
