Candidatus Fukatsuia symbiotica: CCS41_10380
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Entry
CCS41_10380 CDS
T06003
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
fsm
Candidatus Fukatsuia symbiotica
Pathway
fsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CCS41_10380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsm03400
]
CCS41_10380
Enzymes [BR:
fsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CCS41_10380
DNA repair and recombination proteins [BR:
fsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CCS41_10380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AWK14785
UniProt:
A0A2U8I9S2
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All DBs
Position
2187922..2189286
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AA seq
454 aa
AA seq
DB search
MSSIFTVSHLNQSVRQLLEVEIGQIWLSAEISNFSQPSSGHWYFTLKDDHAQVRCAMFRN
CNRRSVVKPQNGQQVLVRASITVYEPRGEYQLIIESMQSAGEGVLQHKFEQLKQRLITEG
IFDQNHKRRLPSPVKQVGVITSVSGAVLHDVLQILQRRDPSLPVVIYPTAVQGTDAPLQI
VRAIEIANQRAECDLLILSRGGGSLEDLSSFNDERVARAIFNSHIVIVSAVGHETDVTIA
DFVADLRAPTPSAAAELVSRNQLELIRQLQVQRQHIEVAMDYYLAQCHQRFTTLNHHLQQ
QHPQLRLAHQQNLLTKLQNRLENGVARQILLPLQRMDRLQQRLAQLPLPRIIHGYQQQIQ
RQSYRLKQALQHQLHCYRQRFGIACSQLEAVSPLATLSRGYNVTQTPAGTVLKTTQQVQT
GDKLITCLQDGWVESEVTQINTTPKMRRNKLFFL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaatttttactgtcagtcaccttaatcaaagcgtgcggcaactgttggaagtc
gaaataggtcaaatttggctaagtgccgaaatttccaatttctcacagccctcttctggt
cactggtatttcactttgaaagacgatcatgcacaggtacgttgtgccatgttccgtaac
tgtaatcgtcggagtgttgttaaaccccaaaacggtcagcaggtacttgtcagagcatcg
atcaccgtatacgaacctagaggtgagtaccaactgatcatcgagagtatgcagagcgca
ggtgagggtgtattacaacacaaatttgaacaacttaaacaacgtttaatcaccgaagga
atatttgaccaaaaccacaagcgacgactacccagcccagttaagcaagttggcgtcatt
acttctgtcagcggtgcagttttacatgatgttttacaaatattacaacgtcgtgatccc
tcactgcctgtggtgatttaccccaccgccgtgcaaggtaccgatgcaccactacaaatt
gtcagagcaatcgaaatcgctaatcagagagcagagtgtgacctgttaattctgagtcgt
ggtggcggctccctggaggatttatcgagtttcaacgatgaacgggtcgcgcgcgctatt
tttaatagccatatcgtgatagtcagtgccgtcggccatgaaaccgatgttaccattgcc
gattttgtcgccgatttacgtgcaccaaccccttcggctgccgctgaattagtgagccgt
aaccagttggagttgatacgccaactacaagttcaacgacaacacatagaagtggcgatg
gattattatctggcacaatgccatcagcgatttaccacacttaatcatcatctacaacag
caacatccacaattacggttggcacatcaacaaaacctgttaaccaagctacaaaacagg
ctggagaatggcgtagccagacaaattctcctgccgttacaacgcatggatcggctacaa
caacgcctagcacagctgccactaccaaggataattcatggttatcagcaacaaatacaa
cggcaatcgtatcgccttaaacaagccttacaacaccaactgcattgctatcgccaacgt
tttggtattgcttgttcccaactggaagccgtcagcccgttagccaccttgtcacgtggt
tataatgtgacacaaactccagcaggcacggtattaaaaacaacccagcaggtacaaaca
ggtgataaattaattacttgcttgcaagatggttgggtagaaagtgaagtcacacaaatt
aataccaccccaaaaatgcgtcgaaacaagttattttttctttag
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