KEGG   Candidatus Fukatsuia symbiotica: CCS41_11390
Entry
CCS41_11390       CDS       T06003                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
fsm  Candidatus Fukatsuia symbiotica
Pathway
fsm02020  Two-component system
fsm02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:fsm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CCS41_11390
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CCS41_11390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fsm03021]
    CCS41_11390
Transcription machinery [BR:fsm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CCS41_11390
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AWK14937
UniProt: A0A2U8I754
LinkDB
Position
complement(2374687..2376120)
AA seq 477 aa
MKQGLQLRLGQQLAMTPQLQQAIRLLQLSTLELQQEVQQMLESNPLLEQTDIHQEIDTKE
IIDSIDQDTCEALEQNEIPEELPLDTTWDEIYTANTPSSMRNDYSDDDLPVYQGETTQSL
QDYLMWQVALTPFSDTDTAIATSIVDAVDETGYLTVPLEDVLESTGNPELTLDEVEVVLK
RMQHFDPIGVAARDLRECLSVQLSQYAKDTPYLIEARLIVSNYLDLLGNRDFRTMIRLSR
LKEQVLKEAIALIQSLDPRPGQSISSSTSEYVIPDIIVRKEGNSWAVELNADSLPRLKIN
QHYAAMSGSVLNDNDNQFIRSNLQEARWLIKSLESRHETLLKVARCIVDQQIEFFENGEE
FMKPMVLADIAHTVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTESGGEASSTAI
RALVKKLVAAEDPAKPLSDSKLTLSLCEQGIIVARRTVAKYRESLSIPPSNQRKQLI
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactccgtctcggccagcaattggcgatgaccccacaactccaa
caggcaatccgtctgttgcagctttcgacgcttgaactgcaacaagaagtacaacagatg
ttggaaagcaatcctctgctagagcaaaccgatattcatcaggaaattgacacaaaagaa
attatcgattctatcgatcaggatacgtgcgaagcgctagaacaaaatgagatacccgaa
gaattgccgctagatacaacctgggacgaaatttacaccgccaacaccccgtcgagcatg
cgtaatgactacagtgatgatgatttgcccgtttatcaaggggaaaccactcaaagcctg
caagattacctcatgtggcaggtggctttaacccctttttcagacaccgataccgccatc
gccacctctattgttgatgcggtagacgaaaccggataccttaccgtaccactggaggat
gtgcttgaaagtaccggaaatcccgaactgaccctcgatgaagtggaagtcgtgttaaaa
aggatgcaacattttgatcctattggtgttgcggcacgtgatttacgtgagtgtttatcc
gtacagctctcgcagtacgccaaagacacgccttatctgatcgaagcgcgtttaatcgtc
agcaattatctcgatttattgggtaatcgcgatttccgtaccatgatccgtttaagtcga
ctaaaagaacaggtacttaaagaagccatcgccctgatccaatcgttggatccacgtcca
gggcagtcgattagtagcagcacatctgagtatgtgatcccagatattatcgtacgtaaa
gagggtaatagctgggcggtggagttgaatgctgatagtttgccacgcttaaaaatcaat
cagcattatgctgctatgagtggcagtgtacttaacgataacgataatcagtttattcgt
agtaatctacaagaggcaagatggttgataaaaagtttagaaagccgccatgaaacgtta
ttgaaagtcgctcgttgtattgtcgatcaacagattgaattttttgaaaacggtgaagaa
ttcatgaaaccaatggtgctggctgatatcgcccataccgtggatatgcatgaatcaacg
atatcccgtgttaccactcaaaaatttcttcacagccctcgaggtatttttgagttaaag
tacttcttctccagtcacgtgaataccgaaagtggaggtgaagcctcttctacggcaatt
cgagcgttggtgaaaaagttggtagcggcagaggatcctgccaagccactcagtgacagt
aaattaaccctgtcgctatgtgaacagggtattatcgtggctcggcgcactgttgcaaaa
tatagagaatcattatccatacccccgtcaaatcaacgtaaacaattgatttaa

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