KEGG   Flavobacterium sangjuense: GS03_00004
Entry
GS03_00004        CDS       T06656                                 
Symbol
rny
Name
(GenBank) Ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
fsn  Flavobacterium sangjuense
Pathway
fsn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fsn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GS03_00004 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fsn03019]
    GS03_00004 (rny)
Messenger RNA biogenesis [BR:fsn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GS03_00004 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 HTH_37 KH-I_KHDC4-BBP UPF0154
Other DBs
NCBI-ProteinID: QBZ96532
UniProt: A0A4P7PR55
LinkDB
Position
2599..4161
AA seq 520 aa
MGTILIIIALIAGIAGGFGIAKFMEKNNISNMVKNAKKEAASILKDANLEGENIKKDKLL
QAKEKFLELKSEHEQEILNKDKRIAEIEKRTRDKESQVSSELAKAKKVNDDFEAKTAEYN
SKIEVLDKKQQELEKLHKSQVQQLEVISGLSAEDAKEQLVESLKAEAKTKAMSHIQDTIE
EAKLTAQQEAKKVIINTIQRVGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRALEAAT
GVEIIVDDTPEAIILSCFDPVRREIARLSLHKLVTDGRIHPARIEEVVAKTTKQIEEEIA
EVGKRTVIDLGIHGLHPELIKVVGRMKYRSSYGQNLLQHSREVSKLCGIMAAELGLNVKL
AKRAGLLHDIGKVPDAESDLPHALLGMQWAEKFGEKEEVCNAIGAHHDEIEMKYLISPII
QVCDAISGARPGARRQVLDSYIQRLKDLENIAFGFNGVKNAYAIQAGRELRVIVESEKVS
DENAASLSFEISQKIQTEMTYPGQVKITVIRETRAVNIAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgggaactatactaattataattgcgctgatagcgggaattgccggaggttttggaatt
gcgaaattcatggaaaaaaacaacatctccaatatggttaaaaatgccaaaaaagaagca
gcatcgattttaaaagatgccaatcttgaaggcgaaaatatcaagaaagacaagttatta
caggcaaaagaaaagtttttggaattaaaatcagagcatgagcaagagattttaaataaa
gacaaaagaattgccgaaatagagaaaagaacacgtgataaagaatcacaggtttcaagt
gaattggctaaagccaaaaaagtaaacgacgattttgaagctaaaacagcggaatacaac
tcaaaaattgaagtcttagacaagaagcaacaagagcttgaaaagcttcataaaagtcag
gtgcagcaacttgaggttatctccggtctttctgctgaagatgccaaagagcaattggtt
gaaagtttaaaagcggaagccaaaacaaaagccatgtcgcatattcaggacactattgaa
gaagcaaaattaacggcgcaacaagaagcgaagaaagtcatcattaacacgattcaacgt
gttggaacggaagaagctgttgagaattgtgtttctgttttcaatattgaatcggatgac
gttaaaggaagaatcattggtcgtgaaggaagaaatatccgtgcgctggaagcagcaacc
ggagttgaaatcattgttgacgatacgccggaagctattatcctttcgtgttttgatccg
gtaagaagagaaatcgcccgattgtcattacacaaattagtaactgacggtagaattcac
cctgcaagaattgaagaagttgttgccaaaacaaccaaacaaatcgaagaagaaattgcc
gaagttggtaaacgtaccgtaattgatttaggtattcacggtttacatccggaattgatc
aaagtggtgggaagaatgaaataccgttcttcttacggacaaaatttattgcaacactca
cgtgaagtttctaaactttgtggaataatggcagctgaattaggcctgaatgtaaaatta
gcaaaacgtgccggtttactacatgatatcggaaaagtacctgatgcagaaagcgattta
ccacacgcattgttaggaatgcaatgggctgaaaaattcggagaaaaagaggaagtgtgc
aacgcaattggagcgcatcacgatgagattgaaatgaaatatttaatctctccaattatt
caggtttgtgatgctatttctggtgcaagaccaggtgcaagacgtcaggttttggattct
tatatccaaagattgaaagatttagaaaacattgcttttggatttaatggtgttaaaaac
gcttatgctattcaagccggacgtgaacttcgtgtgattgttgaaagtgaaaaagtaagc
gatgaaaacgccgccagtctttcttttgagatttcgcaaaaaatccaaaccgaaatgact
tatcctggtcaggttaaaattaccgtaatccgtgaaaccagagcagtaaatattgcgaag
taa

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