Flavobacterium sangjuense: GS03_00168
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Entry
GS03_00168 CDS
T06656
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fsn
Flavobacterium sangjuense
Brite
KEGG Orthology (KO) [BR:
fsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsn03032
]
GS03_00168 (topA)
03400 DNA repair and recombination proteins [BR:
fsn03400
]
GS03_00168 (topA)
Enzymes [BR:
fsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GS03_00168 (topA)
DNA replication proteins [BR:
fsn03032
]
Prokaryotic type
DNA Topoisomerases
GS03_00168 (topA)
DNA repair and recombination proteins [BR:
fsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GS03_00168 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Poly_export
Motif
Other DBs
NCBI-ProteinID:
QBZ96690
UniProt:
A0A4P7PRD2
LinkDB
All DBs
Position
complement(210231..212732)
Genome browser
AA seq
833 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDYQVESSYGHIADLPSKEIGVDVANGFKPKYEVSSDK
KALVTKLKGLAKNADMVWLASDEDREGEAISWHLAEELKLDKSKTKRIVFHEITKNAILK
AIDNPREIDYNLVNAQQARRVLDRLVGYELSPVLWKKVKGGLSAGRVQSVSVRLIVERER
EIQEFKPVASYSVTAEFTNEAGKVVKAKLPKNFATKKEAEDFLNKNIGSTYKVADLETKP
TKKSPAAPFTTSTLQQEAARKLYLPVGITMQVAQRLYEAGLITYMRTDSVNLSQEAMAAA
EAEITKSYGREFSKPRTFSNKSKGAQEAHEAIRPTDMSRSSVNVERDQARLYDLIWKRTL
ASQMSDAELERTNVKIEANNHSEVFQASGEVIKFEGFLKVYLEGNDDDDEEQEGMLPALK
VNERLLNNNITATERYTRAASRYTEASLVKKLEELGIGRPSTYAPTISTIIARTYVEKGN
LEGVERKYTQLMLQANKVDEKILKENTGSDKGKLVPTDIGTIVNDFLVKNFAAILDYNFT
AKVEQDFDEIAEGNIDWAKMMQDFYDKFHPNVLEVGENAERESGERILGKDPKTGKQVLV
RLGKFGPVAQIGEADDEEKQFASLRQEQNIGSITLEEALNLFLLPKNLGIYKGEEVEVSN
GRFGPYVRFGKQFISLPKGEDPLDVTMDRAQELINEKAQADAPIATYKNEPVQKGVGRFG
PFLKWNGIFINVSKKYNFDNLSQADVEELIEEKLQKNIDKVIHNWKEEGILVEKARWGKS
VITKGKIKIELNKDVDASKLTLEQVKELIEKKTPAKKPAAKKATTKKAPAKKK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagttatcgttgagtcaccagcaaaggcaaaaacaatcgagaaattt
ctaggaagcgattaccaagtggagtcaagttatggtcacattgccgacttgccttccaaa
gaaataggggtagatgttgcgaatggttttaagccaaaatacgaagtctcatcagataaa
aaagctttggttaccaaactaaaaggactagctaaaaacgccgatatggtttggttagct
tccgatgaggaccgcgagggagaagccatttcctggcatttagcggaagaattaaaatta
gataaaagcaaaaccaaaagaattgttttccacgaaattaccaaaaacgccatcctaaaa
gcgattgataatccaagagaaatcgattataatttagttaatgctcaacaagcacgtaga
gttttagacagattggttggatacgaactttcgcctgtattatggaaaaaagtaaaaggc
ggattatctgccggtcgtgtgcaatcggtttcagtgcgtttaattgttgaacgtgaaaga
gaaattcaggaattcaaaccagtagcttcttattcggtgactgcagaattcaccaacgaa
gccggaaaagtagtaaaagctaaattgccaaaaaacttcgcaaccaaaaaggaagcagaa
gattttttaaataaaaatataggttctacatataaagtagccgatttagaaaccaagcca
acaaagaaatcaccagcagcgccgtttacaacatcaaccttgcaacaggaagccgcacgt
aaattgtatttgccggttggaattacgatgcaagtcgcgcaacgtttatacgaagccggt
ttgattacgtatatgagaacggatagtgtaaacttgtcacaagaagcgatggctgctgct
gaagctgaaattaccaaatcatacggaagagagttctcaaaaccgagaacgttcagtaat
aaaagtaaaggtgcacaagaggcacacgaagcgattcgtccaacagatatgtcacgcagt
tctgtgaatgttgaaagagatcaggcgcgtttatacgatttgatttggaaaagaactttg
gcctcacaaatgagcgatgctgaattggaaagaaccaacgtaaaaattgaagctaataat
cattcagaagtttttcaggcatcgggagaagtaatcaaatttgaaggtttcttaaaagtt
tatttagaaggtaatgatgatgacgatgaagaacaagaaggaatgttgcctgcattaaaa
gtgaatgaaagattattaaacaacaacatcactgcaaccgaaagatatacaagagcagct
tcaagatatacagaagcttctttggtaaagaaattagaagaattaggaattggtcgtcca
tcgacttacgcgccaacgatttctactatcatagctagaacgtatgttgaaaaaggaaac
ctagaaggtgtagaaagaaaatatacgcagcttatgcttcaggcaaataaagttgacgaa
aagattttaaaagaaaatacaggttctgataaagggaaattagtcccaacagatattgga
acaattgtgaatgactttttggtaaagaattttgctgcgattttagattataattttacg
gctaaagtagagcaggactttgacgaaatcgccgaaggaaatattgattgggcgaagatg
atgcaggatttctacgataagtttcatccaaatgttcttgaagtaggcgaaaatgctgaa
cgtgaaagcggcgaaagaatattaggtaaagatccaaaaacaggtaaacaggttttggtt
cgtttaggaaaatttggtccggtggcccaaattggagaagctgacgatgaagaaaaacaa
ttcgcaagtttgcgtcaggagcaaaatattggcagcatcactttagaagaagcattgaat
ttatttttgttgccaaaaaaccttggtatatataaaggagaagaagttgaagtaagcaat
ggtcgttttggaccttatgttcgtttcggaaaacaattcatctcgttaccaaaaggcgaa
gatccattagatgttactatggatagagcgcaagagttgataaatgaaaaagctcaggct
gatgcaccaattgcgacttataagaatgagccggttcaaaaaggggttggtcgttttggt
ccattcttgaaatggaacgggatttttatcaatgtaagtaaaaaatacaactttgataac
ctatcgcaagctgatgtagaagaattgatagaagagaaattacaaaagaatatcgataag
gtaatccacaattggaaagaagaaggaatcctggttgaaaaagcacgttggggaaaatca
gtaatcaccaaaggcaaaatcaagattgaattaaataaagatgttgatgcttcaaaattg
actttggaacaagtgaaagagttgatagagaagaaaacaccggcaaaaaaaccagctgct
aaaaaagcaacaaccaaaaaagcacctgctaaaaagaaataa
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