Flavobacterium sangjuense: GS03_02221
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Entry
GS03_02221 CDS
T06656
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
fsn
Flavobacterium sangjuense
Brite
KEGG Orthology (KO) [BR:
fsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fsn03110
]
GS03_02221 (clpC)
Chaperones and folding catalysts [BR:
fsn03110
]
Heat shock proteins
HSP100
GS03_02221 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
Sigma54_activat
AAA_16
nSTAND3
AAA_22
AAA_7
RuvB_N
AAA_14
IstB_IS21
TniB
AAA_18
UVR
Zeta_toxin
AAA_3
RsgA_GTPase
DUF815
ATPase_2
Roc
PhoH
KTI12
AAA_25
Torsin
DNA_pol3_delta2
DUF87
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QBZ98711
UniProt:
A0A4P7PUQ7
LinkDB
All DBs
Position
2490050..2492593
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AA seq
847 aa
AA seq
DB search
MDDNFSPRVKDVITYSKEEALRLGHDFIGTEHLMLGILRDGNGKAITILNNLSIDLEHLR
KKVEVLSPANPNVEISNEKKNLHLTRQAERALKTTFLEAKVFQSSSISTAHLLLCILRNE
NDPTTKLLHRLKIDYNVVKEQYLNMTPSEEDFNDNLPTNESYNDDSGQDDSLKEGNFNNP
ANKTNKKSKTPVLDNFGRDLTEMAEEGKLDPVVGREKEIERVSQILSRRKKNNPLLIGEP
GVGKSAIAEGLALRIIQKKVSRILFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEK
NDDIILFIDEIHTIVGAGGATGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGAL
ERRFQKVIVEPTSVEETITILNNIKNKYEDHHSVTYTDEAIEACVKLTNRYMSERFLPDK
AIDAMDEAGSRVHITNIDVPKQILDLERQLEEVRDLKNSVVKKQKYEEAAKLRDDEKRLE
KDLAIAQEQWEEDSKSNRILVTEDNVADVVSMMTGIPVNRIAQTESNKLAHLPDLIKGKV
IGQDEAVLKISRSIQRNRAGLKDPNRPIGSFIFLGQTGVGKTQLAKVLAKELFDSEDALI
RIDMSEYMEKFAISRLIGAPPGYVGYEEGGQLTEKVRRKPYCVVLLDEIEKAHPDVFNMM
LQVLDDGYLTDSLGRKIDFKNTIIIMTSNVGARQLKDFGQGVGFGTAAKIAQADDNSKSV
IENALKKTFAPEFLNRIDDVIVFNPLEKHDIDLIIEIELKKLFGRISELGYTLNLSDKAK
AFIAEKGFDKQFGARPLKRAIQKYVEDALAEEIITSKIASGDTIFMDLDEATQELTVAIQ
KAKKSAS
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggatgataatttttcacctagagttaaagacgtgattacttacagtaaagaagaagct
ttgcgtttaggtcatgactttattgggaccgaacatttgatgctcggtattttaagagac
ggaaatggtaaagcaattactattctcaataatctttctattgatttggaacatttgcga
aagaaggttgaagtactcagcccggcgaacccaaatgtggaaatcagtaatgaaaagaaa
aatctacacttgactcgtcaagcggaacgcgccttgaaaactacttttcttgaagctaaa
gtgtttcaaagttcgtctattagtacggcacatttattattgtgtattttaagaaatgag
aatgatccaacaaccaaactactgcatcgtctgaaaatagactataatgtagttaaagaa
cagtatttaaatatgacaccaagcgaagaagattttaatgataatttgccaacaaacgaa
tcttacaatgatgactcaggacaagatgacagtttgaaagaaggcaattttaacaatccg
gctaataagaccaataaaaaatctaaaacgcctgttttggataattttggtcgtgattta
accgagatggctgaagaaggaaaactcgatccggtagttggtcgtgaaaaagaaatcgaa
agagtttctcaaattcttagccgaagaaagaaaaataatccgttacttattggtgaacct
ggtgttggtaaatctgccatagccgaaggtttagcgttgcgaattattcaaaagaaagta
tcccgaattctgtttaacaaaagagtggtgactttagatttagcatctttagttgccgga
acaaaataccgtggacaattcgaagaaagaatgaaagccgtgatgaacgaattagaaaag
aatgacgacatcatccttttcattgacgaaattcacactatcgttggtgctggtggcgca
actggttcgcttgatgcttccaatatgtttaaaccggctttagcaagaggcgaaatacaa
tgtattggtgctacaacacttgacgaatacagacaatatatagagaaagatggtgcgtta
gaaagacgtttccaaaaagtaatcgtagaacctacttctgtagaagaaacgattacgatt
ttgaataacatcaaaaacaaatacgaagatcaccacagcgtaacgtatactgacgaagct
atcgaagcctgcgttaagttgaccaacagatatatgtctgagcgttttcttccggacaaa
gctatcgatgcgatggacgaagccggttcaagagttcacattaccaatattgatgttcca
aaacaaattttggatttagagcgtcaattggaagaagtacgtgatttgaaaaattctgtt
gttaagaaacagaaatatgaagaagcggccaaacttcgtgatgatgaaaaacgtttggaa
aaagaccttgcaatcgctcaggaacaatgggaagaagattctaaaagcaatcgtattctg
gttaccgaagataatgttgccgatgtcgtatcgatgatgaccggaattcctgtgaatcgt
atcgcgcaaacagaaagcaacaaattggctcacttaccagatttaattaaaggaaaagta
attggacaggacgaagcggttttgaaaatctctcgttctattcaaagaaatcgcgccggt
ttgaaagatccaaatcgtccgattggttcgtttattttcttagggcaaaccggagttgga
aaaacgcagttagccaaagttttagcaaaagagctattcgattctgaagatgctttaatc
agaattgacatgagtgaatacatggagaaatttgccatttcaagattaatcggcgcacct
cctggatacgttggttacgaagaaggcggacaattaaccgagaaagttagaagaaaacca
tattgtgtagtgcttttggacgaaattgaaaaagcgcatccagatgttttcaatatgatg
ttacaggtattagacgatggttatttgacagatagtttaggtcgtaaaatcgattttaaa
aacactatcatcatcatgacttctaatgttggtgcgcgtcaattgaaagattttggacaa
ggtgttggtttcggaactgcagccaaaattgcacaagctgatgacaattcgaaaagcgtt
atcgaaaatgcattgaagaaaaccttcgctcctgaattcttaaacagaatcgacgatgta
attgttttcaatccattggaaaaacacgatatcgatttgattatcgaaatcgaattaaag
aaactgtttggcagaatttctgaattaggatacactttaaatctttcagacaaagccaaa
gcgtttattgctgaaaaaggttttgacaaacaatttggtgcgcgtcctttaaaaagagcc
attcaaaaatatgttgaagatgctttagctgaggaaataatcacttccaaaattgcttcc
ggagatactatctttatggatttagacgaagctacacaagagttgactgttgctatccaa
aaagctaaaaaatctgcgagttaa
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