Flavobacterium sangjuense: GS03_02401
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Entry
GS03_02401 CDS
T06656
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fsn
Flavobacterium sangjuense
Pathway
fsn00040
Pentose and glucuronate interconversions
fsn01100
Metabolic pathways
fsn01120
Microbial metabolism in diverse environments
fsn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GS03_02401
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GS03_02401
Enzymes [BR:
fsn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GS03_02401
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Paralog
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Por_Secre_tail
Beta_helix
DUF8694
Motif
Other DBs
NCBI-ProteinID:
QBZ98889
UniProt:
A0A4P7PV89
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Position
2745587..2748064
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AA seq
825 aa
AA seq
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MKRLFYITFLFMSLNMAAQVTITQATGWKECAYVKWEPLEGVDFYRVYYTCGALTDQIID
TQLIRSYGSYFRADVLGLAPGTYTMKVVPVTAGVEGTPAVSSSVTVTAHDRNGFAHEGGK
VPGAYNLDGTLKTNAVVLYITQNTKNTCSMTVTGATANPCVGLQTILDGFKKGNDLRPLA
VRLIGNITDLSNMLNGDIVIENKNTAGSSITFEGVGSDAYCNGWGVRVKSASNIEIRNLG
FMLTNAAEGDNIGLQQDNDHVWIHNNDMFYGAAGGDADQAKGDGALDCKRSTYVTMSYNH
FWDSGKCNLLGLSEATTTDLYVTYHHNWYDHSDSRHPRVRYYSAHIYNNYFDGNSKYGSG
STLGSSLFVEGNYFRNCKYPMLTSQQGTDIYNSPEGTFSGEDGGTIKAFNNSMSGQTRFV
AYDAVNFPVQFDAYVATTRNETIPSSITSRLGGNSYNNFDTNPALYVNSLVVEDPTTARD
NVIAYSGRVGAGDLTWTFNNGADDTSSAVNTGLAAALAGYTSSLVYIQGEAVVIPNTQTL
NVPNNNDQIVLSGPMADMVFTWGGSATDATVNGLPASGIDYVKDTVAKTITVSGTPTADV
SFTVTTSGPTGTPVTGSGTITTNNIPTGDEIHNFTLQTLNSSFYTFTSCNMNSTPGSATY
DGLTLTARLKMETATSITYTTPAISTLTLVCDPTFNGPIKLDNVNYTTSGGIVVIPSVPA
GAHTISKGSTTNLYYIKTEYTLGLGENPNQQKLVLYPNPVTNTLNIAASDSEVIQEIAVY
NIIGQQVKNVKGDIRLIDMSDLRNGTYLVKVQTDHGIFNGKIVKN
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagactattttacatcacatttttgttcatgtcattaaatatggcagctcaggta
actattactcaggccaccggatggaaggaatgtgcctatgtaaaatgggaaccacttgaa
ggtgttgatttctatagagtgtattatacctgtggtgctttgaccgatcaaataattgac
acccaacttatcagaagttatggcagttatttccgtgctgatgttttagggcttgctccc
ggcacctatacaatgaaagttgtacctgttacagctggtgttgaaggtactcctgcagta
tcgagcagcgtaaccgtaacggctcatgacagaaatggttttgcacatgaaggcggaaaa
gttcccggtgcttacaatcttgatggtactttaaaaaccaatgctgttgttttatatata
acacaaaatacaaagaacacctgttctatgactgtaacgggtgctactgcaaatccatgt
gtaggtttacagactatacttgacggattcaaaaaaggaaatgatcttcgtccattagct
gttaggttaattggaaatattactgatttaagtaatatgctaaatggagatatcgtaatt
gaaaataaaaatacagccggtagttcaatcacttttgaaggtgttggttctgatgcatat
tgcaatggatggggagttcgtgtaaaaagtgcttcaaacattgaaatccgtaatcttggt
tttatgcttaccaatgcagctgaaggcgataatattggactacaacaagacaatgaccat
gtctggattcacaataatgatatgttttatggtgctgccggtggcgacgctgatcaggct
aaaggtgacggtgcattggactgcaaaagatcaacttatgtaaccatgtcatacaatcac
ttttgggatagcggaaaatgcaatcttttgggattaagtgaggctacaactactgattta
tacgttacttatcaccacaattggtatgatcattctgactcacgtcatccacgtgttcgt
tattattctgctcatatttataataattattttgatggaaattcaaaatatggttcggga
tcaactttaggttcttcattgtttgtggaaggtaattacttccgtaactgtaaatatcca
atgcttacttcacaacaaggtacagatatctataatagtccggaaggcactttttcggga
gaagacggaggaacaattaaagctttcaacaacagcatgagtggccaaacaagatttgtt
gcctatgatgccgttaatttcccggttcagtttgatgcttatgtagctaccaccagaaat
gaaacgataccaagtagtatcacttcccgtcttggcggaaatagctataacaactttgac
actaacccggctttatatgttaactcattggttgttgaagatccaactacggcaagagat
aatgtaattgcttattcaggtcgtgttggtgcaggtgatttaacctggacatttaacaat
ggtgctgatgacacttcatctgccgtaaatacaggattagctgctgcattggctggctat
acttccagtttagtatatattcagggtgaagctgttgtaattccaaatacgcaaacatta
aacgttcctaacaacaatgatcaaatcgttttgagtggtcctatggctgatatggtattt
acctggggaggatctgcaacagatgctacagtaaacggattacctgcgtccggaattgac
tatgtaaaagataccgttgccaaaacaattacagtatccggaactcctactgctgatgtg
tcgtttacagttacaactagtggccctacaggaacaccggtaactggatccggaacgatt
acaacaaataatatccctaccggagatgaaatacataatttcactttacaaacattgaat
agttctttctatacatttacgtcttgcaatatgaatagtacgcctggttcggcaacctat
gatggtttgacattgacagcacgtttaaaaatggaaacagctacttctattacctataca
acgccagccatttcgactttaactttggtatgtgatccaacatttaatggacctattaaa
cttgataatgtaaattatacaacttcaggtggaattgttgttataccttcagttcctgcc
ggtgctcatacaatttcaaaaggaagtactacaaatctttattatattaaaacagaatac
acacttggtttaggagaaaatccaaatcagcaaaaattagtactgtacccaaatccggta
acaaacacattaaatattgctgcttccgattctgaggtaatacaagaaatagcggtatac
aacattatcggtcagcaagtgaaaaatgtcaaaggagatattagattgatcgacatgagt
gacttaagaaacggaacttatttagtaaaagtgcaaacagatcacggtatattcaatgga
aaaatagttaaaaattag
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