Candidatus Fokinia solitaria: Fsol_00037
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Entry
Fsol_00037 CDS
T05415
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
fso
Candidatus Fokinia solitaria
Brite
KEGG Orthology (KO) [BR:
fso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fso03021
]
Fsol_00037
Transcription machinery [BR:
fso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Fsol_00037
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
DUF6262
Motif
Other DBs
NCBI-ProteinID:
AWD32851
UniProt:
A0A2U8BR88
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All DBs
Position
complement(31897..32736)
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AA seq
279 aa
AA seq
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MEKHCLYDMTVLKSSVVRLNSEEANLSAYISKIREIPLLTAEEESALIHDWCVNGDVQAA
QKLVMAHMRMVLKIATQYKSYGISIMDLLSEGTLGLMHAVKKFKMDMHCKLATYAMWWIK
ASIQEFILRSWSLLKISTSSLKKRLFYKNTKIREKLSEAEITDSEFINVKHIVSLNAPSL
NTENSTNEEIWNDSTTYDIDALLAHEEESSTKLQVLKTGLSQLSSREASIIEDRFLAEHT
LTLNDVATKHNISAERVRQIEKEALVKLKAFFIAEEKCS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacattgtttatacgatatgacagtcttaaaaagcagtgtagttcgactaaat
tcggaagaagcgaatctgtctgcttatatctcaaaaataagagagataccattactaacc
gctgaagaggagagtgcactcattcatgattggtgtgtaaatggagatgtgcaagctgcg
caaaaattggtaatggcgcatatgaggatggtgttgaagattgccacacagtacaagtct
tatggaatatcaatcatggatttactttcagaaggtacgcttggattgatgcatgcggta
aagaaattcaaaatggatatgcattgcaagttagctacttatgcaatgtggtggataaaa
gcttcaatacaagagtttattttacgttcatggtcacttctaaaaataagcacctcatct
ttaaaaaagaggctcttttataaaaatacaaaaataagagaaaaactcagtgaagcggaa
attaccgacagtgaatttatcaatgtcaagcatatcgtaagcttgaacgcaccatctttg
aatactgagaatagtacaaatgaagagatttggaacgatagtacgacgtatgatatagat
gctttgcttgctcatgaagaagaatctagtactaaactccaagtattgaagacaggtctc
tcacaactttcttcgagagaggctagtatcatagaagacagatttttagcagaacatacc
ttaaccttaaatgatgtcgctacgaagcataatatttccgcagagagagtaagacagata
gaaaaagaagcattagtaaagttaaaagctttttttatcgcagaggaaaaatgctcataa
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