Candidatus Fokinia solitaria: Fsol_00052
Help
Entry
Fsol_00052 CDS
T05415
Name
(GenBank) Poly(A) polymerase I precursor
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
fso
Candidatus Fokinia solitaria
Pathway
fso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fsol_00052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fso03019
]
Fsol_00052
Enzymes [BR:
fso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Fsol_00052
Messenger RNA biogenesis [BR:
fso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Fsol_00052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
DUF5823
TcaA_3rd_4th
Motif
Other DBs
NCBI-ProteinID:
AWD32865
UniProt:
A0A2U8BRA0
LinkDB
All DBs
Position
49131..50390
Genome browser
AA seq
419 aa
AA seq
DB search
MSNALENQRSLFSSECLDLLKVLNAYFEVRVVGGSVRDYLLEKHFHLKFPHRVDYDIVAK
ADFLEITKVLEMHDIHYFDDSQKYGVLKVHYKDVMYDVAAPRKDLECFGRAARVVAGKHI
SWLEDSMRRDFSINAIYCDVENVMHDYHFGIRDLQNQSIVFIGDAVARIKEDYLRILRFF
RFSGLFRSPKFNNLEIEIIRNHRNALHNLSKERIRKEIMALLKTPYYMQSLRIMRSNEIL
NIISPTLDKFVDESEKCALHDSILSIACILIRNGTCNITTILESISQLSKEIILTNHELL
RLKTLMKLYEYTGRLDVAGSDEDYSKRAVFLFGTQAYVDFIKVCDALMNRESSISMKKVK
QYAEITLPINGNDIKLLVKDSTDIGKYKRKAVQIYVDSGFTATKEGIITQLLKARDEKC
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaacgctttagaaaatcaaagaagcttattttcttctgaatgtcttgatcttcta
aaagtattaaatgcttatttcgaggtgagagtagttggaggttcagtacgagattatctg
cttgaaaaacacttccatttaaaatttccgcacagagttgactatgatatagtagctaaa
gccgatttcttagaaattacgaaagttctagaaatgcatgatatacactactttgatgat
tctcagaaatatggcgtactaaaagtgcattataaagatgtaatgtatgatgttgctgca
ccacgtaaggatttggagtgttttggaagagctgcaagagttgttgctggaaaacatata
tcgtggctagaagattctatgaggcgagatttttcaataaatgccatttactgcgatgta
gagaatgtgatgcatgactatcactttggaataagagatttgcaaaatcagtcaatagta
ttcataggagatgcagtagctagaattaaagaagattacctacgtatattaagatttttc
agatttagcggtctatttcgcagtccaaaatttaacaatctagaaatagagataataaga
aatcatagaaatgcattacataatctatcaaaggaaagaattagaaaagaaataatggcg
cttcttaaaacgccatattatatgcagtcgctgaggataatgagaagtaatgagattctt
aatatcatttctcctactcttgataaatttgtcgatgaaagcgagaagtgcgctttacat
gatagtattttaagtattgcatgtattctaatacgaaacggtacttgtaatattacgaca
attcttgaatcaatttctcaattatcaaaagagataatacttacaaatcatgagctttta
agattgaaaacgttgatgaagttatatgaatacacaggtagattagatgtcgcaggaagc
gatgaagactatagtaaaagagcagtttttttatttggtacacaggcatacgtagacttc
ataaaggtgtgtgatgcgctgatgaatagagaatcctctatttcaatgaaaaaggtaaaa
caatatgcggagattacattaccgataaacggtaatgatataaagctgcttgtaaaagat
agtacagatatagggaaatataaaagaaaagcagtacaaatttacgtagatagcggcttt
actgcgacaaaagaaggcattattacacagttattgaaagcgagagacgaaaagtgctaa
DBGET
integrated database retrieval system
