Candidatus Fokinia solitaria: Fsol_00140
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Entry
Fsol_00140 CDS
T05415
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fso
Candidatus Fokinia solitaria
Brite
KEGG Orthology (KO) [BR:
fso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fso03400
]
Fsol_00140
Enzymes [BR:
fso01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Fsol_00140
DNA repair and recombination proteins [BR:
fso03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Fsol_00140
Prokaryotic type
Fsol_00140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWD32948
UniProt:
A0A2U8BRJ2
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All DBs
Position
145713..147080
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AA seq
455 aa
AA seq
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MQRSRINLVVIKNDIRLHDNPALFYAANQDLPIIVVCIDEKLTGHASRWWRLNAVRNFMD
VLADYKIQVIFVENILADFHMIVAFFEIAGIYHNDDLPKFLLTMLIECHITLHKFYPNRL
FSDAFSDVQIKVFSAFIKKALDRLEEIAVMLPLPRFRSIHDSYRLRNVMCAIPQIKGIKW
WSEMENYWQIGEKFALQKWQLFQENARERSILLYAERRDIMSVNGTSLLSPHIHFGEISV
RRMLCDIKSMLVDQSVHKFLSELFWREFSYHTLEHMPDYYYRSKLAHFDKIEWIENDLII
KKWQCGKTGYPIVDAGMRQLWKIGWLPNRVRMIVASFLIKNLHVKWQYGAAWFLDTLVDA
DVASNAFGWQWISGSGVSASPYFRVMNPFLQSRKFDKDGEYIKRWIHELRDVPAKHLHDV
LHEQQYISPIVDLSTTKAAFLKKCMMASRNADLEN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttctagaattaatctcgtagtgattaaaaacgatattagattgcacgataat
ccagctttattttatgcagcgaatcaagatttgccgattatagtagtatgtatagatgaa
aaattgacaggtcacgctagtagatggtggagattgaatgctgtacgaaactttatggac
gtattagcggattataagatacaagtaatattcgttgaaaatatattagcggattttcat
atgatagtagcattttttgaaatagctggaatttatcacaatgacgatttgcctaaattc
ttacttacaatgttgattgagtgtcatattacgcttcataaattttatcctaatcgatta
tttagcgacgcttttagtgatgtgcaaattaaagtctttagtgcgtttattaaaaaagca
ttggatagacttgaagaaatagcagtaatgttaccgttaccgcgatttcgtagtattcac
gattcttatcgtttgcgtaacgtaatgtgcgcaatccctcaaataaaagggataaaatgg
tggagtgaaatggaaaattattggcaaataggtgaaaaatttgctttgcagaaatggcaa
ttatttcaagagaatgcgcgagaaagaagcatattactgtatgcagaacgtagagatatc
atgtctgttaacggtacttcattactttctcctcatatccactttggagaaataagtgta
aggcgaatgctatgtgatataaaatcaatgcttgtagatcaatctgttcacaaatttctc
tcagaattattttggcgagagttttcttatcatactttggaacatatgccagactactac
tatcgctcaaaattagcgcactttgataaaatagaatggatagagaatgatttgataata
aagaaatggcagtgcggtaaaacgggatatcctattgtagatgctggtatgaggcaatta
tggaagatcggatggttacctaacagagtaaggatgattgtagcatcatttctaatcaag
aatttgcatgtgaagtggcagtatggcgcagcgtggtttttggatactttggtagatgct
gatgttgcaagtaatgcatttggatggcaatggatatcaggaagtggagttagcgcatct
ccttattttagagtgatgaatccgtttttacaaagtaggaaatttgataaagatggagaa
tacataaaacgatggatacatgagctaagagatgttccggctaagcatttgcatgatgta
ctgcatgagcagcagtatatttcgccgatagttgatttatctacaacaaaagccgctttc
ttgaaaaaatgtatgatggcaagtcgcaatgcagatcttgagaattaa
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